KEGG   Lachnoclostridium phytofermentans: Cphy_3389Help
Entry
Cphy_3389         CDS       T00619                                 

Definition
formamidopyrimidine-DNA glycolase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
cpy  Lachnoclostridium phytofermentans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:cpy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Cphy_3389
Enzymes [BR:cpy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Cphy_3389
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Cphy_3389
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4145767..4146588)
Genome map
AA seq 273 aa AA seqDB search
MLEIPESIVLSKEINESLVGKVIRYVKANQSPHSFAWYHGNPENYDELLSGKTIVKARPC
GGMLEIKADDCKIVFTDGTSIRYYADRNKAPKKNQLYIEFEDDSALVVTVMMYGGIWAFA
EGEFKNNYYQGAIDKPHPLSEEFDYTYFRSLYTDKCENLSAKAFLATEQRIPGLGNGVLQ
DILFTSGIHPKRKMKNVEEEEFLNLFSAIKSVLRDMVEGGGRDTEKDIFGEEGKYLTYLS
RKTYLTPCTKCGQEIRKANYMGGTIYFCENCQK
NT seq 822 nt NT seq  +upstreamnt  +downstreamnt
atgcttgaaataccggaaagtatagtattatcaaaggaaataaatgaaagtcttgtaggt
aaagtaattcgttatgtaaaagcaaatcaatcaccgcactcttttgcatggtatcatgga
aatccagaaaattatgatgaacttctatctggtaagaccatagtaaaggcaagaccatgt
ggtggcatgttagaaattaaagcagatgattgtaaaatcgtatttacagatggaacatcc
atacgctattatgctgataggaataaagctccaaaaaagaatcaactatatatagagttt
gaagatgattctgcattagtggtaacagtcatgatgtatggaggtatttgggcatttgcg
gagggagaatttaagaataattattatcagggagcaatagataaaccacatccattatct
gaggaatttgattatacttattttaggtccttgtataccgataaatgtgagaatttatcc
gctaaagcattcctagcaaccgaacaaagaatacccggattagggaatggagtacttcag
gatattctttttacctcaggcattcatccaaagagaaagatgaagaatgtagaggaagaa
gaatttttaaatctattctccgcgataaagagtgttcttcgtgatatggtggaaggtggc
ggcagagatactgaaaaagatatatttggtgaagaaggaaagtatcttacttatctaagc
agaaaaacctatctaaccccatgtacaaaatgcggacaggaaataaggaaggctaactat
atgggtggcacaatttacttttgtgagaattgtcagaaatag

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