KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ004871
Entry
CpipJ_CPIJ004871  CDS       T01079                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CpipJ_CPIJ004871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqu03021]
    CpipJ_CPIJ004871
Enzymes [BR:cqu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CpipJ_CPIJ004871
Transcription machinery [BR:cqu03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     CpipJ_CPIJ004871
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF4930
Other DBs
NCBI-ProteinID: EDS43812
VectorBase: CPIJ004871
UniProt: B0WCT6
AA seq 928 aa
MGLNEKDWDAGSKNLKKVQKTLEDKWKLVPAFLQIKGLVKQHIDSFNYFINVDIKNIVRA
NDEVKSDADPCFYLKYLNVAIGMPDVEEGFNNTKSTTPHECRLRDMTYAAPITVDIEYTR
GTQRVVRNGLLIGRMPIMLRSSNCVLSGKSEYELSKVNECPLDPGGYFVIRGTEKVILIQ
EQVSWNKMLTEDYNNVIQCQVTSSTHEKKSRTILLSKHGKYYLKHNSMTEEIPVAIIFKA
MGIASDQEIMQLVGIDTETQKRLAPSLLEAANHKVYTQQRALEYMGSKLIAKRFTTAATK
YKTTADEARDLLATTILAHVPVNNFNFQVKAIYVALMIRRVMAAELDRSAVDDRDYYGNK
RLELAGSLLSLMFEDLFKRFNWELKMIADKNIPKIKAAQFDIVKHMRAALISTGLETAIS
TGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLC
PSDTPEGEACGLVKNLALMTHITTEVDEEPVIRLAYNSGVEDIRLLGGETINNPKVFMVF
INGNILGVTIMYKRLVEVFRMMRRKGLIGSFVSIHTSFSQRCVYIHTDGGRLCRPYIIVQ
NGQPLVKQEHIEQLKVGLRKFDDFLHDGLIEYLDVNEENDSFIAYQELDIDPEKTTHLEI
EPFTLLGVCAGLVPYPHHNQSPRNTYQCAMGKQAMGIIGYNQKNRIDTLMYNIVYPQTPM
VRSRTIELTNFDKLPAGQNATVAVMSYSGYDIEDALILNKASIDRGYGRCLVYKNSKCTI
KRYSNQTFDRIMGPMKDSLTNKIIFRHECLDTDGIISPGEKVSSKQTMVNKEMPAVKSIN
PIEQKESGQQPIAYSGVPITYKGTEPSYIEKVMVSTNNDEEFLVKILLRQTRRPEIGDKF
SSRHGQKRHRTDQQDYSLTSVKKAKTQF
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgggtctcaacgagaaggactgggatgcgggcagcaaaaacttgaaaaaggtgcagaaa
acgctggaggacaaatggaagctggtgccggcgttcctgcagatcaagggtctggtcaag
cagcacatcgattcgttcaactacttcatcaacgtggacatcaagaacattgtgcgggcg
aacgacgaggtcaagagcgatgccgatccgtgcttttacctgaagtatctgaacgtggcc
atcgggatgccggacgtggaggagggctttaacaataccaagtcgacgacgccgcacgag
tgccggctgcgggacatgacgtacgcggcgccgatcacggtggacattgagtacacgcgg
ggcacgcagcgggtagtgcggaatgggttgttgattgggcggatgccgattatgctgcgg
tcgtcgaattgtgtgctgagtgggaagtccgagtacgagctgtcgaaggtgaacgaatgt
ccgctggatccgggcggttactttgtgattcgtgggacggagaaggtgattttgattcag
gagcaggtttcctggaacaagatgctgacggaggattacaacaacgtgatccagtgccag
gtgacgagttcgacgcacgagaagaagtcgcggacgattttgctgtccaagcatggcaag
tactacctgaagcacaactcgatgacggaggagattccggtggcgatcatttttaaggcg
atggggattgcgtcggatcaggagattatgcagctggtggggatcgatacggagacgcag
aagaggctggcgccgtcgctgttggaggctgcgaaccacaaggtttacacccagcagcgt
gcgttggagtacatgggatcgaagttgattgcgaagcgattcacgacggcggccacgaag
tacaagacgacggcggatgaggcgcgggatttgctggcgacgacgattttggcgcacgtc
ccggtgaacaactttaactttcaggtcaaagcgatctacgtggcgctgatgatccggcgc
gtgatggccgccgagctggaccggtcggcggtggacgaccgcgactactacggcaacaag
cggctcgagctggccggttcgctgctgtcgctgatgttcgaggacctgttcaagcgcttc
aactgggagctgaagatgatcgccgacaagaacattccgaagatcaaggcggcccagttt
gacattgtgaagcacatgcgggcggcgttgatctcgacggggttggagacggcgatatcg
acggggaattggacgattaagcggttcaagatggagcgggcgggtgtgacgcaggtgttg
tcgcggttgagctacatttcggcgctggggatgatgacccgggtgaactcgcagtttgag
aagacgcggaaggtttcgggaccgcgatcgctgcagccgagccagtggggaatgctgtgt
ccgtcggatacgcccgagggcgaggcttgcgggttggtgaagaacttggcgctgatgacg
cacattacgacggaggtggacgaggaacctgttattcggttggcttacaattctggggtg
gaggatattcgcttgcttggaggggagacgatcaacaatccgaaggtgtttatggtgttc
atcaacggtaacattttgggggtgacgatcatgtacaagcggttggtggaggtgttccgg
atgatgcgtaggaaggggttgatcgggtcttttgtgtcgattcatacgtcgttttctcaa
cgctgcgtttatattcacacggatggcgggagattgtgccggccgtacattatcgttcag
aacggacaaccgctggtgaagcaggagcacattgagcagctgaaggtggggttgcgcaag
tttgacgactttttgcacgacgggttgattgaatatctggacgtgaacgaggagaacgat
tcgttcatcgcgtatcaggagcttgatattgatccggagaagacgacccacctggagatt
gaaccgttcacgttgttgggagtttgcgctgggttggttccgtacccgcaccataaccag
agtccccgtaacacgtaccagtgcgctatgggtaagcaagcgatgggaattatcgggtac
aaccagaagaaccggatcgacacgttgatgtacaacattgtctacccgcaaacgccgatg
gtgcgctcgcggacgatcgagttgaccaactttgataagctgccggccgggcagaacgcc
acggtcgcagttatgagctactccgggtacgatatcgaagatgcgttgatcctgaacaag
gcctcgatcgaccgcggctacggacgctgtctggtgtacaaaaacagcaagtgcaccatc
aaacggtacagcaatcagaccttcgatcgcatcatgggccccatgaaggactcgctcacc
aacaagatcatcttccggcacgagtgtctcgacacggacggaatcatctcccccggggaa
aaggtctcgtccaaacagaccatggtcaacaaggaaatgcccgccgtcaaatccatcaac
ccgatcgaacagaaagagtccggccagcagccgatcgcgtacagcggcgtcccgatcacg
tacaagggcacggaaccgagctacatcgaaaaggtcatggtttcaacgaacaacgacgaa
gagttcctcgtcaagatcctgctgcgtcaaactcgccgtccggagatcggcgacaagttc
agctcgcgccacggccaaaagcgtcaccggactgatcagcaggattatagccttacctca
gtgaagaaggcaaaaactcagttttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   VECTORBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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