KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ005256Help
Entry
CpipJ_CPIJ005256  CDS       T01079                                 

Definition
TFIIH basal transcription factor complex p52 subunit
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
Basal transcription factors
Nucleotide excision repair
Module
Holo-TFIIH complex
Brite
KEGG Orthology (KO) [BR:cqu00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    CpipJ_CPIJ005256
  Replication and repair
   03420 Nucleotide excision repair
    CpipJ_CPIJ005256
Transcription machinery [BR:cqu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CpipJ_CPIJ005256
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
VectorBase: 
UniProt: 
AA seq 492 aa AA seqDB search
MSDSKSSKAASSSSSGTSSLIAKPANLECKNLEEYLRSRPPDALEKLYNYPAICLAVYRE
LPEIARQFVIRILFVEQPIPHAVVSSWGSQIYAKENTAVSKVLTELGVWRSTGLTGGLEG
WELCSTFKKNLKIALLGGGRPWSMSNALDPDQKSRDIEFLDGYAMSRWRCVLHYMVGAGS
SKGMEGEGISPDAVRILLHANLMKRDETDGSPVITRQGFQFLLLDTQAQVWHFMLQYLDT
CEARGLDLAECLSMLFQLSFSTLGRDYSSEGLSQGLLTFLQHLREFGLVYQRKRKEGRFY
PTRLAHNITSRNAVPTIQEDGSAAQDKGYIVVETNYRVYAYTDSNLQVALLGLFTELLYR
FPNLVVGVLTRDSVRQAFRGGITADQIISYLEQHAHPTMHNVEQTINTKSALPPTVVDQI
KLWENERNRFTYTEGVVYNQFLSQGDFNTLRDYAQSIGVMIWQNERTRTMVVTKNGHDDV
KKFWKRYSKGGG
NT seq 1479 nt NT seq  +upstreamnt  +downstreamnt
atgtcggactccaagagctccaaggcggcgtcctcttcctcatcgggcacgtcctcgctg
atcgccaagcccgcaaatctcgagtgtaagaatttggaggaatatctccggtcgcgcccg
ccggacgccctggaaaagctgtacaactatccggccatctgcctggccgtgtaccgggaa
ctgccggagattgcgcgtcagtttgtgatccggattctgttcgtggagcagccgattcct
cacgcggttgtttcgtcgtgggggtcgcagatttacgccaaggagaatacggctgtgtcg
aaggtcctgacggagttgggagtgtggcgcagcactgggttgaccggtggtttggagggt
tgggagttgtgttcgacttttaagaagaatctaaaaattgcgttgcttgggggaggtcgc
ccatggtcaatgtctaatgcgttggatccggaccagaaatcgcgagatattgagtttttg
gatggttatgccatgtcccggtggcggtgcgtgctgcattacatggtcggagcggggagt
tccaagggaatggagggagaaggcatttcaccggacgcggtacgaattttgctgcatgcc
aatttgatgaaaagggacgaaaccgatgggagtccggtgattacgaggcagggtttccag
ttcttgctgttggacacgcaggcacaggtgtggcactttatgctgcagtacttggacact
tgcgaggcgcggggtctggatttggccgaatgcctctcgatgttattccagttgagcttt
tccacgctgggtcgtgactacagttcggaagggttgagccaaggtcttttgacgttcctt
caacatctgcgagaatttggtctcgtctaccagcgcaaacgtaaagagggtcgtttctac
ccaactcgactagcgcacaacataacgtctcgcaatgccgtaccgacgattcaggaggac
gggtcggcggcccaagacaagggctacattgtggtcgagaccaattaccgcgtgtacgcg
tacacggattccaacctgcaggttgcactgctgggactgttcaccgagcttttgtaccgc
tttcctaatttggtggtcggcgtgctgacacgggactcggtccggcaggcgttccgcgga
ggcataacggccgatcaaatcatcagctacctcgagcagcacgcacatccgacgatgcac
aacgtcgagcaaacgatcaacaccaagtcggccctgccgccgaccgtcgtcgaccagatc
aagctgtgggaaaacgaacggaaccggttcacgtacaccgagggcgtcgtgtacaaccag
ttcctgtcgcagggcgacttcaacacgctgcgggactacgcccaatcgatcggggtgatg
atctggcaaaacgagcgcacgaggaccatggtcgtgacgaagaatggccacgacgacgtg
aaaaagttctggaagcgatactccaagggcggcgggtaa

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