KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ010550
Entry
CpipJ_CPIJ010550  CDS       T01079                                 
Name
(GenBank) DNA polymerase theta
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cqu03400]
    CpipJ_CPIJ010550
Enzymes [BR:cqu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CpipJ_CPIJ010550
DNA repair and recombination proteins [BR:cqu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    CpipJ_CPIJ010550
SSDB
Motif
Pfam: HTH_61 DEAD Helicase_C ResIII POLQ_helical HHH_5 AAA DUF4332
Other DBs
NCBI-ProteinID: EDS34516
VectorBase: CPIJ010550
UniProt: B0WTQ8
AA seq 1224 aa
MPGVPQRARPPGLPRGTGPSTGWRQAAPRGPPPPRPQIAPVVGSTTAAARSVGNTTRDNL
MSMDDTLLNAVDLAGIERMASQKDTQPVVFKKPEQTRAGFMLQAARLRPLSPAAKSPSPK
KARSSGPSRYIVLDISQKDSPDGAKSVQDGWLNRKESPPGKLSATIPNSRKSLFESRIST
PKRKSSNEVVASSSKPKIPKEPTVDMFQLDSQAFDDWESEQMELVLPKAKPLEAVVQQVD
DDDDYFPSYQEAVDPNCSQLFLEEVDRNGKKPLTQVGTPLRSPEVHSIVKNSATCSQYIR
LERSMMEENNANLLDDVVDSQLAREFDSSQQRQQIMGVFNEFERTLLDTSNVEFNDPPPP
EVDADLAEINWEEDVTIAAEKPSNRSRLAHIFGKQASVGSPKLVARKSAPLVSSHFKDMG
PYFGLPTQVKRLIAKYRGIEELYDWQKECLGLTAIVERHNLIYALPTSGGKTLVAEIIML
REVMLRNRNVMFIVPYVSIAQEKLAALAPFAVDLAFLVEEYSGGKGAIPPRKRKHKNSIF
VCTIEKALVLMDGLIEVDRANEVGLIVIDELHMIGEDRRGVHLEVLLTKVKAIQAGIQVV
GMSATIGNLDEIARFMEADIYCRDFRPVELQEYVKCGMDLFEINTKARTLEEAFKTKKEV
DFGYTEEQRRVDPDHVIALVTDVIPTKSCLVFCPTKRQCEQLCTLMTDCLPRELLLHRTK
EHLLASAFLLGIAYHHSGLSFDERKMIEDAYRLGILSLIICTSTLAAGVNLPAKRVIIRS
PFIATNFTTLSRYKQMAGRAGRAGLGEPGESILICQKKDIGAVCNLLCSPMDDANSSLHT
DNGNYLKNLILSSIGLGLCSTRNDVQKFMAKTLLALQAERLGVDLRQLTDRTLQTLYKEN
AINAKSDGCKKTPVNMTIRFDETESSQAEPANESAQIHELHVTRGAKGTSDEGKLVKTMK
KNTRLVINELGKAAIRAGFHMDKARRFYDEMERIGERLNVLDQYHLLYVIVLEDDGTLRP
TDADLKAFVALIQQEQRLAFAQRFHVGEITVQKMSSCIRFPSDLRNTVNRFFRMTIVSEL
WDLVPPQRVARKYKLDAGSVQQLMTNVASTASGLLRMTEQLPKLWAYRQLLATMTQRLSH
CCTIELLPLMELPGVKIARAKQLWRAGFTSLASIAAAKSSDLVTMVEYMNHRNASQLIMA
AKAKLMEQVEELRDRVEDYLQVIR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgcccggcgtcccacagcgggcccgtccacccggtcttccacggggaaccgggccatcc
acgggctggcgacaggctgccccgcggggaccgcccccacctcggccgcagattgctccg
gtggtcggttctacgacggctgcggctagaagtgttgggaacacaacgcgggacaatctg
atgagtatggacgatacgctgctgaacgcggtggatttggccggaattgagcggatggcc
agccagaaggacacacaacccgtcgtgttcaagaagccggaacagacccgggctggtttt
atgttgcaagctgcccgcttgcgtccgctgtctccggccgccaagtcaccgtcaccgaag
aaggctcgctcgtccggtccaagccggtacatcgtgctggacatttcgcagaaggattcc
cctgacggagcgaagtccgttcaggatggttggctcaatcggaaggaatcgccgcccggg
aagctctccgcgaccatcccgaactcgcgcaagtcgctgttcgagtcgcggatctccacg
ccaaagcgcaagagctcgaacgaggttgtggcgtcatcgagcaagccgaagatcccgaag
gaaccgaccgtggatatgttccagctggactcgcaagccttcgacgactgggagagcgag
cagatggaactggtgttgccgaaggcgaagcctttggaggcggtcgttcagcaggtcgat
gacgacgatgattacttcccgagctaccaggaggccgtcgatcccaactgcagccagtta
ttcctagaggaagtcgatcgcaacgggaagaagcctctgacgcaggtcggaacgccgctc
cgttcccccgaagtgcactcgatcgtgaagaacagcgcaacctgctcgcagtacatccgg
ctcgagcgctccatgatggaggagaacaacgcgaacctgctggacgacgttgtggacagt
cagctggcgcgggagttcgattcgtcccagcagcgccagcagatcatgggcgtgttcaac
gagtttgaacgcaccctgctggacacgagcaacgtcgagttcaacgacccgccgccgccg
gaggttgatgcggacctggccgaaatcaactgggaggaggatgtgacgatcgcggccgag
aaaccgtcgaaccgatcccggctggcgcacattttcggcaagcaggcgagcgtgggttcg
ccgaagctggtggctcgcaagtcggcaccgctggtgtcgtcccactttaaggacatgggt
ccgtacttcgggctgccgacgcaggtcaagcgcctgattgcgaagtatcgcgggattgag
gagttgtacgattggcaaaaggagtgcctcgggctgacggcgatcgtcgagcggcacaac
ctgatctacgcgctcccgacgagcggcgggaaaacgctcgtcgccgagatcatcatgctg
cgcgaggtgatgctacggaaccggaacgtcatgtttatcgttccgtacgtttcgatcgcg
caggaaaagctggccgccctggcaccgttcgccgtcgatttggccttcctggtggaggag
tacagcggcggcaagggggcgattccgccgcggaagcgcaaacacaaaaactcgatcttt
gtgtgtacgatcgaaaaggcgctggttctgatggacgggttgattgaggtagaccgggcg
aacgaggtcgggttgattgtgattgacgagctgcacatgatcggggaggatcggcgggga
gtgcacttggaggtgctgctgacgaaggtgaaggccatacaggcggggattcaggttgtg
gggatgagtgcgaccatcgggaatctggacgagatcgctcggtttatggaggcggacatt
tactgtcgagattttcggccggtcgagctgcaggagtacgtcaagtgcgggatggatctg
tttgagatcaacacgaaggctcggacgttggaggaggcgttcaaaactaagaaggaggtt
gattttggctacacggaagagcagcgtcgggtcgacccggatcacgtgattgcacttgtt
acggacgtaatacccacgaagtcgtgtctggtgttctgtccgacgaagcggcaatgcgag
cagctgtgtaccctcatgacggattgtttgccccgggagctgttgctgcaccggaccaag
gagcacctgttggcaagtgcgtttctgctgggcatcgcttaccaccactcgggactgtcg
ttcgacgagcgcaagatgatagaggacgcctacaggctggggatcctctcgctgatcatc
tgtacgtcaacgctggccgccggtgtcaacctccccgccaagcgagtcatcatccgatcc
ccgttcattgctaccaattttacaactctcagcaggtacaaacagatggcagggcgtgcg
ggtcgcgccggcctcggtgaacctggagagagcattctaatctgccaaaagaaggacatc
ggggcggtgtgcaatcttctttgctcgcccatggacgacgccaactcgtcgctgcacacc
gacaacggtaactacctcaagaacctaatcctcagctcaatcggactgggactgtgctcc
acccgaaacgacgtccaaaaattcatggccaaaactctgctggcgctgcaagccgaacgg
ctcggtgttgacctgcgtcagctgaccgaccgaacgctgcaaacgctctacaaggagaac
gccatcaacgccaagagtgacgggtgcaagaagacccccgtcaacatgacgattcgattc
gacgaaaccgaaagcagccaggccgaaccggcaaacgagagcgcccagatccatgagttg
cacgtaacgcgcggagcgaaaggcacctcggacgagggaaaactcgtgaaaacgatgaag
aaaaatacccgactggtgatcaacgaactgggcaaggccgcaatacgggcgggctttcac
atggacaaagcccgccgattctacgacgagatggagcgcatcggggagcggttaaacgtg
ctcgaccagtaccacctgctgtacgtgatcgtgctggaggacgacggaacgctgcggcca
acggacgcggatctaaaagcgtttgtcgccttgatccagcaagagcaacgcctcgccttc
gcccaaagatttcacgttggcgagatcacagtacaaaaaatgagcagttgcatacggttt
ccgtccgacctgcgcaacaccgtcaaccgcttcttccggatgacgatcgtcagcgaactg
tgggacctcgtaccgccccagcgggtcgcccgaaagtacaagctcgacgccggctcggtc
cagcagctcatgacgaacgtggcgtcgaccgcgtccggactgctgcgtatgaccgagcag
cttccgaaactgtgggcctaccgccagctgctcgccaccatgacccagcggctgtcccac
tgctgcacgatcgaactgctgccgctgatggagctgccgggtgtaaaaattgcacgcgca
aagcagctctggagggcgggcttcacctccttggcatcgatagcggccgctaagtcaagt
gatctggtgacaatggtagagtacatgaaccatcgcaacgcgagtcagctcatcatggcc
gccaaggccaaactgatggaacaggtcgaggaactgcgggacagagtcgaggactacctc
caggtgattcggtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   VECTORBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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