KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ013139
Entry
CpipJ_CPIJ013139  CDS       T01079                                 
Name
(GenBank) pre-mRNA-splicing helicase BRR2
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CpipJ_CPIJ013139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqu03041]
    CpipJ_CPIJ013139
Enzymes [BR:cqu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CpipJ_CPIJ013139
Spliceosome [BR:cqu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CpipJ_CPIJ013139
 Complex C
   U5 SnRNP specific factors
    CpipJ_CPIJ013139
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_30 AAA_22 AAA_19 HTH_61 SWI2_SNF2 PhoH nSTAND3 T2SSE
Other DBs
NCBI-ProteinID: EDS38587
VectorBase: CPIJ013139
UniProt: B0X1D8
AA seq 2144 aa
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVLSLVGKLDGTKMGDRHQRTK
PEKTEERKAKRQKRDEAQYDFNSMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEAIGDQPRDILCGAADEILAVLKNDKLKDRERKREIDGLLGTVTDERFALLVNLGKKIT
DFGTDSAVAAGAGAGVTTDEHIDETYGINVQFEESEEESDEDKYGEIRDDDVLDEGEEAR
DDGMLHAENLGGNEEGKKEKALDPRDIDAYWLQRSLRKYYNDSVMSQAKAAEVMNIFKSA
ADDRECESQLVNLLGFDCFDFLKLIKKNRQMILYCTMLASSQSESERVKIREKMKADPFL
AKILRQLDTGKQEVDDYDSEKSKMQRRRKEQDDDNMEGIGGQIPGSRTVLELDELAFTQG
SHLMANKRCQLPDGSFRKQRKGYEEVHVPALKPKPFEEEEELMVIEKLPKYVQPVFAGFK
TLNRIQSRLYKTALESDENLLLCAPTGAGKTNVALLTMMREIGKHINDDGTINVDEFKII
YIAPMRSLVQEMVGNFGKRLATYNLTVSELTGDHQLSREQIAATQVIVCTPEKWDIITRK
GGEKTYTQLVRLVIIDEIHLLHDERGPVLESLVARTIRNIETTQEDVRLVGLSATLPNYQ
DVATFLRVRPETGLFYFDNSYRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGKN
QVLVFVHSRKETGKTARAIRDMCLEKDTLGSFLREGSASMEVLRSEAEQVKNGELKDLLP
YGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKG
RWVELGALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQLISKMPD
MLNAEIVLGTIQNVKDAVTWLGYTYLYIRMLRQPTLYGVSYDAIKEDPLLEHFRANLVHT
AALHLEKSGLIKYDRKSGHFQVTEIGRIASHYYCTHDTMLTYNQLLKPTLSEIELFRVFS
LSGEFRNITVREEEKLELQKLMERVPIPIKESMEEPSAKVNVLLQAYISQLKLEGFALMA
DMVYVTQSASRLLRAIFEIVLHREWAQLADKCLTLCKMIDRRMWQSMSPLRQFRKMPEEI
VKKIEKKNFPWERLYDLEANEIGELIRVPKLGKTIYKYVHQFPKLELSTHIQPITRSTLR
VELTITPDFQWDEKVHGQSEAFWILVEDVDSEVILHHEYFLLKYKYCQDDHLVKFFVPVF
EPLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNLPPTELLDLQPLPISALREPRFEE
LYADRFPQFNPIQTQVFNAVYNSEDNVFVGAPTGSGKTTIAEFAVLRMLQQNPHGRVVYL
VSRDALAELIFMDWHQKFGQNLGCKVVKLTGETGTDLKLIAKGQIIVTTADKWDILSRRW
KQRKNVQNIQLFIVDELQLIGGEEGPVLEVVCSRMRYISSQIEKQIRIIALSASLSDARD
VAQWLGCNANATFNFHPSVRPIPLELHVQGFNITHNASRIAAMSKPVYNAVTKFSPHKPV
IVFVSSRKLARLTAIDILTYCAAEAQPNRFFHAEEEDIKPFLDRMTDKTLKETLSQGVAY
IHEGLTASDHRIVEQLFDSGAVQIAVVTRDLCWGLNISAYLVVIMDTQFYNGKSHSYDDY
PVTDVMQMVGRANRPLEDDDAKCVLMCQSSKKDFFKKFLNESLPVESHLDHRMHDHFNAE
IVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVESTLSDLEQS
KCISVEDEMDTLPLNLGMIAAYYYINYTTIELFSLSLNAKTKIRGLLEIISSAAEYEDVV
VRHHEDNILKSLAARLPNKLTGPNGTAPKYNDPHIKTNLLLQAHLSRLQLGAELQGDTEQ
ILGKAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFNADIVKRC
QEKNIETVFDIMELDDEDRIRLLQLNDQQMSDVARFCNRYPNIEMTFEVVDKDRIHSGSS
VNVVVNLEREDDVTGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKVKLDF
VAPSPGHHDYTLYYMSDSYLGCDQEYKFNINVGDFQSESESESD
NT seq 6435 nt   +upstreamnt  +downstreamnt
atggctgacgcagcagctcggcagctgcagtacgagtacaaagcgaactcgaacttggtg
ctgcaggcggatgtgcggttgattgagcgtccgcggcgggatgaagctaccggggaggtg
ttgtcgctggtgggcaagttggacgggactaagatgggcgatcggcaccagcggaccaag
ccggaaaagacggaggagcggaaggccaagcggcagaagcgagacgaggcgcagtacgat
tttaacagcatgaagggcgcgacgctgctgtcggaggggattgatgagatggtcgggatt
gtgtatcggccgaagacgcaggaaacgcggcagacttatgaggtgttactcagttttatt
caggaagcgattggagatcaaccgagggatattttgtgcggggcggccgatgagattttg
gcggtgctgaagaatgataagctgaaggatcgcgaaaggaagcgcgagattgatgggttg
ctcgggacggtcacggatgagcggttcgcgttgttggttaatttggggaagaagattacc
gactttgggacggattcggctgtcgctgcgggggcgggagctggggtgaccaccgacgag
catattgatgagacgtacgggattaatgtgcagtttgaagagtcggaagaggagagtgat
gaggataagtacggagagatccgggatgatgacgtgttggacgagggggaggaggcgcgt
gacgacggaatgttgcacgcggaaaacctcggtggcaacgaggaaggcaagaaggagaaa
gcgcttgatccgcgggacattgacgcatactggttgcaacggtcacttcgaaagtattac
aacgattcggtcatgtcccaggcgaaggctgcggaggtgatgaacatcttcaagagtgct
gctgacgaccgggagtgtgagagtcagctggtcaatctgcttgggtttgactgtttcgat
ttcctcaagttgatcaagaagaacaggcagatgattctgtactgtacgatgctggcttcg
tcgcagagcgaaagcgagcgggtcaagattcgcgaaaagatgaaggctgatccgtttctg
gcgaagattttgcgtcaactggacacgggcaagcaggaggtagatgattacgatagcgaa
aagagcaagatgcaacgccgtcggaaggaacaggacgacgacaatatggagggcatcggg
ggacaaattcctggtagtcgaactgtgctggaattggacgaactcgcgttcacccaaggc
tcccacctgatggccaacaaacggtgccagctgcccgacggaagtttccgcaaacagcgc
aaaggttacgaagaagtgcacgtgccggcgttgaagccgaaaccctttgaagaggaagag
gaactgatggtcatcgagaagctgcccaagtacgtgcagcccgtgttcgccggtttcaaa
acgctcaaccgaatccagagtcgtctgtacaagacggccctcgagagcgatgagaatcta
ctgctgtgcgccccgaccggtgccggtaaaacgaacgtggccctgctcaccatgatgcgc
gagatcggcaagcacatcaacgacgacggaacgatcaacgtggacgagttcaagatcatc
tacattgcgccgatgcgatcgctcgtacaggaaatggtcggaaactttggcaaacgcctc
gccacgtacaacctgaccgtgtccgagttgaccggagatcaccagctgagtcgggagcag
attgccgcaacgcaggtcatcgtgtgcacgccggaaaagtgggacatcatcacgagaaag
ggcggcgaaaaaacgtacacccagctggttcggttggtcatcatcgacgaaatccatctg
ctgcacgacgagcgtggtccggtgctggaatcgctggtcgcacgaacgatccgtaacatt
gaaaccacccaggaagatgtccgcctggttggactgtccgccacccttccaaactaccaa
gacgtggcgacgttcctgcgagtgcgaccagaaaccggtctgttctactttgacaacagc
taccggccggtcgccctggagcagcagtacattggcgtgacggagaagaaggcgctcaag
cggttccaggtcatgaacgacatcgtgtacgagaaggtgatggaacacgccggcaagaac
caggtgctggtgtttgtgcactcgcgcaaggaaacggggaagacggcgcgcgccatccgg
gacatgtgcctggagaaggacacgctcgggagcttcttgcgggaaggttccgccagtatg
gaggtgttgcgctccgaagcggagcaggtgaagaacggtgagctgaaggacttgcttccg
tacgggtttgcgatccatcacgccgggatgacgcgagttgatcgtacgctggttgaagat
ctgttcgccgatcggcacatccaggtcctggtttcgacggccactcttgcgtggggtgtg
aatctcccggcgcacaccgtcatcatcaagggaacgcaggtttacaacccggaaaaggga
cgctgggtcgagttgggcgcgttggacgtgctgcagatgttgggtcgtgcgggtcgtccc
cagtacgacacaaaaggcgagggaatcctcatcaccaaccacagcgagctgcagttctac
ctgtctctgctgaaccaacaactccccatcgaatcgcagctcatctccaaaatgcccgac
atgttgaacgccgaaatcgtgctcggtacgatccagaacgtcaaggacgccgtcacctgg
ctcgggtacacgtacctgtacatccggatgctccgccaaccgacgctgtacggcgtgtcg
tacgacgccatcaaggaggacccactgctggagcacttccgcgccaacctggtccacacc
gcagctctgcacctcgagaagagtggcctcatcaagtacgaccgcaaaagcggtcacttc
caggtcaccgaaatcggtcgaatcgcctcccactactactgcacgcacgacaccatgctc
acgtacaaccagctgctcaagccaaccctcagcgagattgaactgttccgcgtgttttcc
ctgtccggcgagttccgcaacatcacagttcgcgaggaggagaaactcgagctgcaaaag
ctgatggagcgcgtcccgatcccgatcaaggaaagcatggaggaacccagcgccaaggtc
aacgtcctcctgcaagcctacatctcccagctgaagctcgagggcttcgccctgatggcc
gacatggtgtacgtgacccagtccgcgtcccgactgctgcgtgccatcttcgagattgtc
ctgcaccgggagtgggcccaactggcggacaagtgcctcacgctgtgcaagatgatcgat
cggcgcatgtggcagagcatgtccccgttgcgtcagttccgcaagatgcccgaggagatc
gtgaagaagatcgagaagaagaacttcccgtgggagcggctgtacgatctggaggcgaac
gagatcggagagttgattcgcgtgccgaagctgggcaagaccatctacaagtacgtgcac
cagttcccgaagctggagctgtccacgcacattcaaccgattacgcgatctacgctgcgc
gtcgagttgaccatcacgccggacttccagtgggacgagaaggttcacggccagtcggag
gcgttctggattttggttgaggacgtcgactccgaggtgatcctgcaccacgagtacttc
ctgctcaagtacaagtactgccaggacgaccacctggtgaagttcttcgtgccggtgttt
gaaccgttgccaccgcagtacttcctgcgcatcgtgtccgaccggtggattggcgccgag
acgcaactgccggtttcgttccgccacctgattctaccggagaagaatctgccgccgacg
gagctgctcgatttgcagccactgccgatcagtgcgctgcgtgagccacgcttcgaagag
ctgtacgcggaccggttcccgcagtttaacccgatccagacgcaggtcttcaacgcggtg
tacaacagcgaggacaatgtgtttgtgggtgcgccaaccgggtcgggcaagacgacgatc
gcggagtttgccgtgctgcgaatgttgcagcagaatccgcacggtcgggttgtctatttg
gtctcgagagacgcgctggccgagctgatcttcatggattggcaccagaagtttggccag
aacttgggctgcaaggtggtcaagttgacgggggaaaccggaacggacttgaagctgatt
gccaagggacagatcatcgtgaccacggcagacaagtgggacattttgtctcggcgttgg
aagcagaggaagaacgtccagaacatccagctgtttattgtggacgagctgcagctgatt
ggcggtgaggaaggacctgtgttggaggtcgtctgctcccgtatgcggtacatttcgtcc
cagattgagaagcagattcggatcatcgccctgtcggcatcgctgtcggacgcccgggac
gtagctcaatggctgggttgtaacgcgaatgcgaccttcaacttccacccgagcgtgcgg
ccaatcccgctggaactgcacgtgcagggattcaacattacgcacaacgcgtcccgcatt
gcggccatgtcgaagccggtgtacaacgccgtaaccaagttcagtccgcacaaaccggtg
attgtgtttgtgagctcgcggaagttggctcgattgacggcgattgacattttgacgtac
tgcgcggcagaagctcaaccgaatcggttcttccacgccgaagaggaggacattaagccg
ttcctggatcgcatgacggataaaacgctgaaggagaccctctcgcaaggggttgcgtac
atccatgaaggcttgacggcgtcggatcatcgcatcgtggagcagttgttcgattccggg
gcggtgcagattgccgtcgtcacgcgggatctgtgctggggtttgaacatttccgcctac
ctggtggtcatcatggacacgcagttctacaacggtaagagtcactcgtacgacgactac
ccggttacggacgtcatgcagatggtgggacgggccaaccgtccgctggaggatgacgac
gccaagtgcgtgctgatgtgtcagagctccaagaaggacttcttcaagaagttcctcaac
gagagtctaccggtggaaagtcatctggatcatcgtatgcacgatcacttcaacgcggag
atcgtcaccaaaaccatcgaaaacaaacaggacgccgttgattaccttacctggacgttc
ctgtaccgacgactcacccagaaccccaactactacaacctgcagggcgtcacccaccga
cacttgtcggaccacctgtccgaactggtcgagtcgaccctctccgacctggagcagtcc
aagtgcatcagcgtggaggacgagatggacacgctgccgctgaatctgggcatgatcgct
gcgtactactacatcaactacaccacgatcgagctgttcagcttgtcgttgaacgccaag
accaagatccgcggcctgctggagatcatctcgtcggcggccgagtacgaggacgtggtc
gtgcgtcaccacgaggacaacattctgaagagtttggccgcgcggttgccgaacaagctg
accggtccgaacggaaccgctcccaaatacaacgacccccacatcaagacgaacctgctg
ctgcaggcgcacctctcccgcctccagctcggcgccgaactccagggcgacaccgagcag
atcctcggcaaggcgatacgcctcatccaagcttgcgtggacgtgctcagctcgaacggg
tggctctcgccggccgtcgccgccatggagctcgcccagatggtgacgcaggccatgtgg
agcaaggactcgtacctgaagcagctgccgcactttaacgccgacattgtgaagcgctgc
caggagaagaacatcgaaaccgtgttcgacatcatggagctggacgacgaggaccgcatc
cggctgctgcagctcaacgatcagcaaatgtcggacgtggcacggttctgcaaccgctac
cccaacatcgagatgacgttcgaggtcgtcgacaaggaccgcatccactcgggctcgtcc
gtcaacgtggtggtcaacctggagcgggaggatgacgtcaccggaccggtcattgcgccg
ttcttcccacagaaacgcgaggagggctggtgggtggtgatcggcgacccgaagacgaac
tcgctgctctcgatcaagcggctgacgctccagcagaaggccaaggtcaagctggacttt
gtggcgcccagcccgggccaccacgactacacgctgtactacatgagcgactcgtacctg
ggctgcgaccaggagtacaagttcaacatcaacgtcggcgacttccagtcggagagcgag
agcgagtcggattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   VECTORBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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