KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ013501
Entry
CpipJ_CPIJ013501  CDS       T01079                                 
Name
(GenBank) Lsm5 protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03018  RNA degradation
cqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CpipJ_CPIJ013501
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CpipJ_CPIJ013501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqu03019]
    CpipJ_CPIJ013501
   03041 Spliceosome [BR:cqu03041]
    CpipJ_CPIJ013501
Messenger RNA biogenesis [BR:cqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CpipJ_CPIJ013501
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CpipJ_CPIJ013501
Spliceosome [BR:cqu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CpipJ_CPIJ013501
SSDB
Motif
Pfam: LSM SM-ATX LSM14
Other DBs
NCBI-ProteinID: EDS38994
VectorBase: CPIJ013501
UniProt: B0X264
AA seq 92 aa
MAQSTVSNQSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTEYENT
PEGRRITKLDQILLNGNNITMLVPGGDLPEAS
NT seq 279 nt   +upstreamnt  +downstreamnt
atggctcaatcaacggtctcaaaccaatcaacgctgctgccactggaattggtggacaag
tgcatcgggtcgcgcattcacatcatcatgaagaacgacaaggaaatcgtgggaacgttg
ctcgggttcgacgactttgtcaacatgctgctggaggacgtgaccgagtacgaaaacacc
cccgagggccgccggataacgaagctggaccagatcctgctgaacggcaacaacatcacc
atgcttgttccgggaggtgatctaccagaagcttcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   VECTORBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system