KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ013568
Entry
CpipJ_CPIJ013568  CDS       T01079                                 
Name
(GenBank) exosome complex exonuclease RRP43
  KO
K12586  exosome complex component RRP43
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CpipJ_CPIJ013568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqu03019]
    CpipJ_CPIJ013568
Messenger RNA biogenesis [BR:cqu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CpipJ_CPIJ013568
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: EDS39928
VectorBase: CPIJ013568
UniProt: B0X3N6
AA seq 274 aa
MDLKTYKKIHPVKYYKDHLESNIRPDGREVGDLRPLAINFGSITSADGSSIVKIGNTTVV
CGIKAELAPPKPVEPETGFLVPNIEISPLCSPKYRPGPPSEEAQVYSCSLADAILNSGCV
NLKDLCITKEKLVWALYCDLVCLDHDGCVFDASVIALVAALHTLTLPRMRHNADTDEREV
LEEEPREALTLSSIPVTTSFAVLCGRIVADPTAEEEALATCTITITICDATLSYINKSGG
DPVEQELLDQCIENAMKREKSVRALIKTMVKNKK
NT seq 825 nt   +upstreamnt  +downstreamnt
atggatcttaaaacttacaaaaaaattcacccggtcaaatactacaaggaccacctcgag
agcaacataaggccggatgggcgggaagtcggtgatctccgcccgctggccatcaacttt
ggctcgatcacatcggccgacgggtcgtcgatcgtcaagattggtaacacgaccgtcgtg
tgcggcatcaaggccgagttggcgcctccgaaaccggtcgagccggaaaccggatttctg
gtgccgaatatcgagatttctccgctgtgctcgcccaagtaccgtccgggaccgcccagc
gaggaggcccaggtttacagctgctcgctggcggatgcaatcttgaactcgggctgtgta
aacttgaaggatctttgcatcacgaaggagaagctcgtttgggcgttgtactgcgacctg
gtttgcctggaccatgacgggtgcgtgtttgacgcgtcggtgattgcgctggtggctgcc
ctgcacacgctgacactgccgcggatgcgccacaacgcggacacggacgagcgagaggtg
ctggaggaggaaccgcgggaagcgctcacgttgagctcgattccggtgacgacgtcgttt
gcggtgctctgcgggaggattgtggcggatccgaccgcggaggaggaggcgctggccacg
tgcaccatcacgatcaccatctgtgacgccacgttgagctacatcaacaagagcggcggc
gatccggtggagcaggaactgctggaccaatgcatcgagaacgccatgaagcgggaaaag
tcggtccgggcgctgatcaagacgatggtgaagaataaaaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   VECTORBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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