KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ014241
Entry
CpipJ_CPIJ014241  CDS       T01079                                 
Name
(GenBank) ATP-dependent RNA helicase WM6
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13]
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03013  Nucleocytoplasmic transport
cqu03015  mRNA surveillance pathway
cqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CpipJ_CPIJ014241
  09122 Translation
   03013 Nucleocytoplasmic transport
    CpipJ_CPIJ014241
   03015 mRNA surveillance pathway
    CpipJ_CPIJ014241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqu03019]
    CpipJ_CPIJ014241
   03041 Spliceosome [BR:cqu03041]
    CpipJ_CPIJ014241
Messenger RNA biogenesis [BR:cqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CpipJ_CPIJ014241
Spliceosome [BR:cqu03041]
 Complex C
  Other components
   EJC/TREX
    CpipJ_CPIJ014241
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CpipJ_CPIJ014241
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-ProteinID: EDS40025
VectorBase: CPIJ014241
UniProt: B0X3U8
AA seq 423 aa
MADNDDLLDYEDEDQTEQVAAEPAEQPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTESVPYVLVMCHTRE
LAFQISKEYERFSKYMPSIKVAVFFGGLPIQKDEEVLKSTNPHIIVGTPGRVLALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRNTPHGKQVMMFSATLSKDIRPVCKKFMQ
DPMEVYVDDETKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMVQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggccgataacgacgatcttttggactacgaggacgaggaccagaccgagcaggtggcg
gcggagccggccgagcagcccaagaaggacgtcaagggcacgtacgtgtctattcacagc
tccggcttccgggactttctgctcaagccggagattctgcgcgccatcgtcgattgcggt
ttcgagcatccgtcggaggttcaacacgaatgtatcccgcaggcggtgctcggcatggac
attctgtgccaggccaagtccggtatgggaaagacggcggtgtttgtgctggcgacgctg
cagcagctggaaccgacggagagcgtcccgtacgtgctggtgatgtgccacacgcgcgag
ctggcgttccagattagcaaagagtacgagcgcttctccaagtacatgcccagcattaag
gtcgccgtgttcttcggcggtctgcccatccagaaggacgaggaggtgctcaagtccacg
aacccgcacatcatcgtcggaacgcccgggcgcgtgctcgcgctgatccggaacaagaag
ctgaacctgaaacacctgaagcacttcatcctggacgagtgcgacaagatgctggaacag
cttgacatgcgccgcgacgtgcaggaaattttccgcaacacgccgcacggcaaacaagtc
atgatgttctcggccacgctcagcaaggacatccggccggtgtgcaaaaagttcatgcaa
gaccccatggaagtttacgtggacgacgagaccaagctgaccctgcacggcctccagcag
cactacgtcaagctgaaggagaacgagaagaacaaaaagctgttcgagctgctcgacgtg
ctcgagttcaaccaggtcgtcatcttcgtcaagtcggtgcagcgctgtatggccctggcc
caactcctgaccgagcaaaacttccccgccatcggcatccaccgcggcatggtccaggag
gagcgcctctcgcggtaccagcagttcaaggactttcagaagcgaatcctcgtcgcgacg
aacctgtttgggcgcggaatggacattgagcgcgtcaacatcgtgttcaactacgacatg
ccggaggactcggacacgtacctgcatcgggtggcgcgcgccggtcggttcggaacgaag
gggctggccatcacgttcgtgtcggacgagggcgacgcgaagatcctgaacgaggtgcag
gaccggttcgacgtcaacatcaccgagctgccggacgaaatcgatctctcgtcgtacatt
gaaggacgataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   VECTORBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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