KEGG   Capsella rubella (pink shepherd's-purse): 17881925
Entry
17881925          CDS       T02984                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 10
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    17881925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crb03019]
    17881925
Messenger RNA biogenesis [BR:crb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     17881925
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     17881925
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 17881925
NCBI-ProteinID: XP_006286536
UniProt: R0GRD7
Position
Unknown
AA seq 282 aa
MAETLKEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDL
NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIEL
LRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDSISWVTFHGGYDFGYLVKLLTCKELP
LKQADFFKLLFVYFPTVYDIKYLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTL
GSFRKLKERYFPGSTEKYTGVLYGLGVEDGTTTTTTTTTVAN
NT seq 849 nt   +upstreamnt  +downstreamnt
atggcggagactctgaaagaagattcgattatgattcgggaggtttgggattacaattta
gttgaggaattcgcgctgatccgtgagattgttgacaaattcagctatatcgctatggat
actgagttcccaggtgtggttttgaagcctgttgctacttttaagtacaataacgatctt
aactacaggactctcaaggaaaatgtcgatttgcttaaattgattcaagttggcttaacc
ttttctgatgagaatgggaacctccccacttgtggcacggataagttctgtatctggcag
ttcaatttccgtgagtttaacatcggtgaggatatctacgccagcgagtccatcgagctg
ttgcgtcagtgtgggattgatttcaagaagaacattgagaaaggcattgatgtggttagg
ttcggtgagcttatgatgtcctctgggattgttttgaacgattctatctcgtgggttacg
ttccatggaggttacgatttcgggtatttggttaagctgctgacttgcaaggagttgcct
ctcaagcaggctgatttcttcaagcttctgtttgtgtatttccccactgtttacgatatc
aagtacttgatgacgttctgcaacgggctgtttggcggattgaacagactcgctgagctt
atgggagtggagagagttgggatatgtcatcaagctggctctgatagcttgctcacctta
ggctcgtttaggaagctcaaggaacgttatttcccgggatcaactgagaaatacactgga
gtcttgtatggtctaggtgtggaagacggtactactactactactactactactactgtt
gctaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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