KEGG   Capsella rubella (pink shepherd's-purse): 17881983
Entry
17881983          CDS       T02984                                 
Name
(RefSeq) cyclic nucleotide-gated ion channel 2 isoform X2
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:crb00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    17881983
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:crb04040]
    17881983
Ion channels [BR:crb04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   17881983
SSDB
Motif
Pfam: cNMP_binding Ion_trans TMEMspv1-c74-12 IQ
Other DBs
NCBI-GeneID: 17881983
NCBI-ProteinID: XP_006287115
UniProt: R0H8Y4
Position
Unknown
AA seq 724 aa
MPSHPNFISRWIGLFSDKFRRQTTGIDENNGGDSTSSGSDETPVLSSVECYACTQVGVPA
FHSTSCDQAHAPEWRASAGSSLVPIQEGSLPNPLRARFRRLKGPFGEVLDPRSKRVQRWN
RALLLARGMALAVDPLFFYALSIGRTSGPACLYMDGAFAAVVTVLRTFLDAVHLWHVWLQ
FRLAYVSRESLVVGCGKLVWDPRAIASHYARSLTGFWFDVIVILPVPQAVFWLVVPKLIR
EEKVKLIMTILLLIFLFQFLPKIYHCFCLMRRMQKVTGYIFGTIWWGFALNLIAYFIASH
VAGGCWYVLAIQRVASCIRQQCMRTGNCNLSLSCKEEVCYQFVSPTSTIGYPCLSGNLTS
VVKKPMCLDSNGPFRYGIYRWALPVISSNSLAVKILYPIFWGLMTLSTFANDLEPTSNWL
EVVFSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCRDMEWWMKRRQLPSRIRQR
VRRFERQRWTALGGEDELELIQDLPPGLRRDIKRYLCFDLINKVPLFRGMDDLILDNICD
RAKSRVFSKDEKIIREGDPVQRMIFIMRGRAKRIQSLSKGVIATSMLEPGGYLGDELLSW
CLRRPFIDRLPPSSATFVCLDNIEAFSLGSDDLKYITDHFRYKFANERLKRTARYYSSNW
RTWAAVNIQMAWRRYRKRTRGEINGGGGGSMSPVSENSVEGNSERRLLQYAAMFMSIRPH
DHLE
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgccctctcaccccaacttcatctccaggtggattggactgttttccgacaaattccgt
cgacaaacgactggaatcgatgaaaacaacggcggagattccaccagcagcggcagcgat
gaaacgccggttctgagctccgtcgagtgttacgcttgtactcaagtaggcgtcccagct
ttccactcaactagctgcgatcaagctcacgcgcccgagtggcgtgcctccgcaggctct
tctctagttcccatccaagaaggatccctccccaaccctctccgagctcgcttcaggcgt
ctcaaaggtcccttcggcgaagttctcgatcccaggagcaagcgcgtccagagatggaac
cgcgcgttgcttctagctcgcgggatggccttggccgtggatccgctcttcttctacgcc
ctctccattggtcgaacctccggccccgcctgtctctacatggacggcgcgttcgccgcg
gtggtcacggtgctccgcacttttctcgacgctgttcatctttggcacgtgtggcttcaa
ttcagactggcttacgtctcgagagagtcgcttgttgtcggttgtggcaagctcgtttgg
gatccacgcgccatcgcgtctcactacgcacgctccctcactggcttctggtttgatgtt
atcgtcattctccctgtgcctcaggctgtgttttggttagtcgtgccgaaactgataaga
gaagagaaggttaagctgataatgacgattcttctgctaatattcttgttccaattcctc
cccaagatttatcactgcttctgcttgatgagaaggatgcaaaaggtcactggctacatt
tttggcactatttggtggggttttgctcttaatctcatcgcatatttcatcgcttctcat
gttgctgggggatgctggtatgttctcgcaatacagcgtgttgcttcttgcataagacag
caatgcatgagaaccgggaactgcaacctgagtctgtcttgtaaagaagaggtctgttac
caatttgtgtcacccacaagcacaattggatatccatgcttatctggaaaccttaccagt
gttgtcaagaagcctatgtgcttagattcaaacggaccattccgatatggtatctaccga
tgggcacttccagtcatctccagcaattctcttgcggttaagatcctttatcccatcttc
tggggtctaatgactctcagcacattcgcgaatgatcttgagcccacaagcaactggctc
gaagttgttttcagtatagttatggtccttagcgggctattactcttcacgctattgatt
gggaacattcaggtgtttttgcatgcagtaatggcgaaaaaaaggaaaatgcagatacgc
tgtagggacatggaatggtggatgaaacgtaggcagttaccttcccgaataagacagaga
gttaggcgatttgagcggcagagatggactgccttgggtggagaagatgagctagaactt
atacaagatttgcctccaggtctccgaagagatatcaaacgatatctttgctttgatctc
attaacaaggtgccattgttcaggggcatggacgatttgatcctcgacaacatttgtgat
cgggctaagtctcgtgttttctctaaagatgaaaagataatccgtgaaggtgatcctgta
cagagaatgatattcatcatgcgtgggagagccaaacgtatccagagcctaagcaaaggg
gtcatagccactagtatgctggaaccagggggttacttaggagacgagctactctcgtgg
tgcctacgtcgtccatttattgatcgtcttcccccttcttcggcaacatttgtctgcctc
gacaacatcgaggcattctccctaggatccgatgatcttaagtacatcaccgatcatttc
cgttataaatttgcgaatgagcggcttaagcggaccgcaagatactattcctcaaactgg
aggacgtgggccgccgtgaatattcagatggcgtggcgccggtacaggaaaagaacccgt
ggtgaaatcaacggcggtggaggcggttcgatgagtcctgtgtcggagaatagcgttgaa
ggtaacagtgaacgccggttacttcagtatgccgcgatgttcatgtccatccgaccgcat
gatcatctcgaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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