KEGG   Capsella rubella (pink shepherd's-purse): 17890254
Entry
17890254          CDS       T02984                                 
Name
(RefSeq) phospholipase D beta 1 isoform X2
  KO
K01115  phospholipase D1/2 [EC:3.1.4.4]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb00564  Glycerophospholipid metabolism
crb00565  Ether lipid metabolism
crb01100  Metabolic pathways
crb01110  Biosynthesis of secondary metabolites
crb04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:crb00001]
 09100 Metabolism
  09103 Lipid metabolism
   00564 Glycerophospholipid metabolism
    17890254
   00565 Ether lipid metabolism
    17890254
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    17890254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crb04131]
    17890254
Enzymes [BR:crb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.4  phospholipase D
     17890254
Membrane trafficking [BR:crb04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Phospholipases
    17890254
 Endosome - Golgi transport
  Others
   Others
    17890254
SSDB
Motif
Pfam: PLD_C C2 PLDc PLDc_2
Other DBs
NCBI-GeneID: 17890254
NCBI-ProteinID: XP_006295936
UniProt: R0HGL5
Position
Unknown
AA seq 1090 aa
MENHGPRYPYPYGQYPYPYPYPAPYRPPSSEPYPPPPTNQYNAPYYPYPPPPYATPPPPY
ASPPPHHHTSGSHSGPLDYSHNPQPSSHAGPPEYHRHSFDYQHQPSPYPYPGPPTPQPQG
NFGAYGPPPHYSYQDPAQYPPPETKPQEPPPQQTQGYPEYRRQDCLSSVGTPHDNVSNSG
SSYPPVDELLSGLHISNNQPAPSVPQLSSLPSNSWQSRPGDLYGYPNCSFPSNSHLPHLG
RVDSSNSYTPSYGSTESPHSGDMQMTLFGKGSLKVLLLHGNLDIWIYHAKNLPNMDMFHK
TLGDMFGRLPGKIEGQLSSKITSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAH
HAAEVHFVVKDSDVVGSQLIGLVTIPVEQIYSGAKIEGTYPILNSNGKPCKPGANLSLSI
QYTPMDKLSVYHHGVGAGPDYQGVPGTYFPLRKGGTVRLYQDAHVPEGMLPGIRLDNGMS
YEHGKCWHDMFDAIRQARRLIYITGWSVWHKVKLVRDKVGPASECTLGELLRSKSQEGVR
VLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRNAGKRHSWVKQREV
GTIYTHHQKNVIVDADAGGNRRKIVAFVGGLDLCDGRYDTPQHPLFRTLQTIHKDDFHNP
TFTGNLSGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAKPTGIKKFKTSYDDALLRI
DRIPDILGVSDTPTVSENDPEAWHVQIFRSIDSNSVKGFPKDPKDATCKNLVCGKNVLID
MSIHTAYVKAIRAAQHFIYIENQYFIGSSYNWNAHKDIGANNLIPMEIALKIAEKIRANE
RFAAYIVIPMWPEGVPTGAATQRILYWQHKTMQMMYETVYKALVETGLEGAFSPQDYLNF
FCLGNREMVDGIDNSGTGSPSNANTPQALSRKSRRFMIYVHSKGMVVDDEYVVIGSANIN
QRSMEGTRDTEIAMGGYQPQHTWARKHSGPRGQIYGYRMSLWAEHMATLDDCFTQPESIE
CVRKVRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGS
FIAIQENLTI
NT seq 3273 nt   +upstreamnt  +downstreamnt
atggagaatcacggtccacgctacccatacccttatggccagtatccatacccttaccca
tacccagctccttatagacctcccagctcagagccatatccaccaccccctaccaatcaa
tacaatgccccttattatccttacccaccacctccatatgctacaccaccaccaccatat
gcctcacccccgcctcatcaccacacttcaggttcccattctggtccattagactatagc
cacaacccacaaccatcatctcatgccggtcctccagagtatcaccgccattctttcgac
taccaacatcaaccttctccttacccttatcctggccctccaacacctcaaccccaaggt
aactttggcgcttatggcccccctcctcactattcttatcaagatccagcccaatacccc
ccacctgaaactaaaccccaagagcctcctcctcagcaaactcaaggctatccagaatat
cgtaggcaagactgtctcagttctgttggaacacctcatgataacgtaagcaattccgga
tcttcttatcctcctgttgatgaacttctcagtggtctgcatatttcgaataaccaacca
gctccctcagttccacaattatcctccctcccttccaactcttggcaaagtcgccctggg
gatttgtatggttaccctaactgctcatttccaagtaactctcatttgccacacttaggg
cgagtagattcttcaaattcttatactcctagctatggatctactgaatctccgcatagt
ggggatatgcagatgactctatttggtaaaggatcgctgaaggtcctattgttgcacggg
aatttggatatttggatctatcatgcaaagaacctcccaaatatggatatgttccataag
acactgggtgatatgtttggaagattaccaggaaaaattgaagggcaacttagcagtaag
atcaccagtgatccttatgtttctgtatcagtagcaggtgctgtgattggaagaacatat
gtcatgagcaacagcgaaaatcctgtttggatgcaacatttctatgttcctgttgctcat
catgctgcagaagttcattttgttgttaaagacagtgatgtcgtcggttcacagcttata
ggactggttacaatcccagtggaacagatatactctggtgcaaaaattgaaggaacttat
ccaattctaaacagtaatgggaagccttgtaaaccaggggcaaatttgtcattatcaatc
cagtatactcctatggacaaactcagtgtttatcatcatggagttggggcaggtcctgat
taccagggggtacctggaacatactttccgcttagaaaagggggaactgtgagattgtat
caagatgcacatgtcccagaagggatgctcccgggtataagattggacaatggaatgtct
tacgaacatgggaagtgttggcatgatatgtttgatgccatacggcaggcgaggcgatta
atttatatcacaggttggtcagtgtggcacaaagttaagctggttcgtgataaagtaggt
ccagcatcagaatgtacacttggggagctcctaagatcaaagtcccaagaaggcgtgaga
gtcctgcttttgatttgggatgacccaacttcacgaagcatcttagggtataaaacagat
ggcgttatggcaacccatgatgaggagacacggcgttttttcaaacactcctcagttcaa
gtcctgctctgtccccgaaatgctggaaagagacatagttgggtcaagcagagggaagtt
gggacaatctatacacatcaccaaaagaacgtaatagttgatgctgatgctggtggcaac
agacggaaaattgtagcttttgttggtggtcttgatctgtgtgacggccgatatgacact
ccccaacatccgttgttcaggacactacagacaattcataaagatgattttcacaacccc
acttttacgggaaacctttctggatgtccaagagagccttggcatgacttacacagtaag
atcgatggccccgctgcgtatgatgtactgaccaacttcgaggagagatggttgaaggct
gcgaagcctaccgggatcaagaagtttaagacttcctatgacgatgcgctgttaaggatt
gatagaattccagatatattaggagtttctgatactcctactgttagtgaaaacgatcct
gaggcatggcatgttcagattttccgttcaatcgactcaaactctgtgaaaggtttccca
aaggatccaaaagatgctacgtgcaagaacttggtgtgtgggaagaacgtgctgattgat
atgagcatacacacagcgtatgtcaaagccattcgtgcagcccaacactttatctatatt
gagaatcagtatttcattgggtcttcctacaactggaatgcgcataaggacataggtgcg
aataatttgattcctatggaaattgcattgaagatagctgaaaagatcagggcaaatgaa
cgttttgctgcatatattgtcattccaatgtggccagaaggtgttccaactggtgctgct
acccagaggattctatattggcagcacaagacaatgcagatgatgtatgagactgtctac
aaggcattagtggagacagggcttgaaggagcattctccccacaagattacctcaatttc
ttctgtcttgggaacagagaaatggtggatggaattgataactcaggaacagggagtcca
agcaacgcaaacactcctcaggcattgagtcggaaaagcagaagatttatgatctatgtt
cactcgaaagggatggtagttgatgatgaatacgtagtaattgggtctgcaaatataaac
caacgatcaatggaaggcacaagagatacagagattgcaatgggaggttaccagcctcaa
catacatgggcaaggaaacattccggtccacggggtcagatctatggatacagaatgtcg
ctttgggcagagcatatggcaacattagacgactgtttcactcaaccggagagtatagaa
tgtgtaagaaaagtgagaacaatgggagagaggaactggaaacagtttgcagctgaagaa
gtttcggacatgagaggacatttgttaaagtatccagtagaagttgatcggaaaggtaaa
gtccgaccacttccagggagtgagacgttcccggacgtcggaggtaacattgtcggatcg
ttcatagccatacaagagaatctaaccatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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