KEGG   Capsella rubella (pink shepherd's-purse): 17893785
Entry
17893785          CDS       T02984                                 
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:crb00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    17893785
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:crb04040]
    17893785
Ion channels [BR:crb04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   17893785
SSDB
Motif
Pfam: Ion_trans DUF6525 cNMP_binding
Other DBs
NCBI-GeneID: 17893785
NCBI-ProteinID: XP_023642549
Position
Unknown
AA seq 762 aa
MASHNENDDIPMLPISDSSSRSRAFTSRTRSASLSNPTSSIDGFDNSNVVLGYTGPLRAP
RRPPLVQMSGPLTSTRKPEPLFLPHPSTSSSGVSSQLERYPSALEHKNSSDDDFVLKHAN
LLKSGQLGMCNDPYCTTCPSYYNRKAAQIPHSRVSAIFDSTFHNALYDDAKGWARRFSSS
VNRYLPGIMNPHAKVVQSWTKFFALSCLLAIFIDPLFFFLIKVQERNKCIMIDWPMTRAF
VAVRSVTDVIFTMNILLQFRLAYVAPESTVVGAGQLVSHPKKIALHYFRGKFFLDLFIVM
PLPQILILWIIPKHLGVSGANYAKNLLRAAVLFQYIPKLYRLLPFLAGQTPTGFIFESAW
ANFVINLLTFMLAGHVVGSCWYLFGLQRVNQCLRNACGSLDRGCRDLIDCGNGNSSDVQV
RATWRDNASAIACFQEDGFPYGIYSKAVNLTSHSSLFTRYSYSLFWGFQQISTLAGNQVP
SYFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGKRNLEMTLRRRDVEQWMSHRRLPE
GIRKRVREAERFNWAATRGVNEELLFENMPDDLQRDIRRHLFKFLKKVRIFSLMDESILD
SIRERLKQRTYIGSSTVLHRGGLVEKMVFIVRGEMESIGEDGSILPLSEGDVCGEELLTW
CLERSSVNPDGTRIRMPSKGLLSNRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQ
GAIRYESPYWRLRAARQIQVAWRYRRRRLQRLYSPQSSYSRG
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggcttcccataacgagaacgatgatatccccatgcttccaatttcagactcgtcatct
cgtagcagagctttcacttccaggacccgtagcgcttctctctcaaatcctacttcctcc
attgacggattcgacaactcaaatgtggttttaggctacacgggtcctcttcgagctccg
agacgtcctccgttagttcaaatgagtggtcctcttacctctactcgcaaacctgaacct
ctctttcttccccatccttctactagttcttctggtgtctcttctcagcttgagaggtat
ccttctgctcttgaacataaaaactcctcagacgatgactttgttttgaaacacgcgaat
ctcttgaaatcgggacaactagggatgtgtaatgatccttactgtaccacttgcccttct
tattacaaccgtaaggctgctcaaattcctcactctagagtttctgccatttttgattcc
acgttccataatgctctgtacgatgatgctaaaggttgggctaggcgtttttcttcctct
gtcaatagatacttacctggaatcatgaatcctcatgccaaagtggttcaaagctggact
aaattcttcgctctttcatgcttgttagctatttttatagatcctctcttcttcttcctc
attaaagtccaagagcgaaacaaatgcattatgattgattggccaatgactagagcattt
gttgctgtgagaagtgtgacagatgttatattcactatgaacattctactacagttccga
ttagcctacgtagctcctgagtctactgtggttggtgctggccagttagttagtcatccg
aagaaaattgccctccattatttccgaggaaagtttttccttgacttgttcatagtgatg
ccacttccacagatattgatattatggataataccaaaacacttgggggtatccggagca
aactatgcaaaaaaccttctacgagctgcagttcttttccagtacattccaaagttatat
agacttctaccatttcttgctggacaaacaccaactggatttatatttgagtcagcttgg
gctaattttgtcattaatcttctcaccttcatgcttgctggacatgttgttggctcttgc
tggtatctttttggtctgcagagagtgaatcaatgccttcgaaatgcttgcggtagtctt
gaccgtggatgtcgagatcttatagattgtggtaatggaaatagcagcgatgtacaagta
cgagctacctggagagataacgcgagtgccattgcttgtttccaagaagatggttttcct
tatggaatctattcaaaagcagtcaatcttaccagtcattctagtctcttcacaagatac
agttactctctcttctggggttttcagcaaatcagcactcttgctggtaaccaagtccca
agctactttctaggggaggtcttctttacgatgggtatcattggactaggacttttgctt
tttgcgcttcttattggcaatatgcaaaatttccttcaagctcttggtaaaagaaatttg
gaaatgacgctgagacggcgtgatgtggaacaatggatgagccatagacggttgcctgaa
ggtataagaaagagggtgcgagaagctgagaggttcaactgggctgctactagaggcgtt
aacgaagagctgctctttgagaatatgcctgatgaccttcaaagagatataagacgccac
ctcttcaaatttctcaagaaggtgagaatattttctttgatggatgaatcaatcttagat
tcgatccgcgagagactgaaacagaggacatacatagggagtagcacagtgttgcaccgc
ggaggattagttgagaaaatggtattcatagtgagaggtgagatggagagcattggagaa
gacggttctattctgccattatcggaaggcgatgtttgtggtgaagaactcctcacttgg
tgcctcgaacgctcttctgtaaaccccgatggaacgaggataaggatgccatcaaaggga
ttgcttagcaacaggaatgtgagatgtgtgacaaacgtggaggcattttcgctgagtgta
gctgatcttgaagacgtaacaagcttgttctcgagattcctgaggagccatagagtacaa
ggagccataaggtatgagtctccatattggaggttgcgagcggctaggcagattcaagtg
gcgtggagataccgtagaagacggcttcagagattgtactctcctcagtctagttacagc
cgaggttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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