KEGG   Capsella rubella: CARUB_v10011435mgHelp
Entry
CARUB_v10011435mg CDS       T02984                                 

Definition
hypothetical protein
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
crb  Capsella rubella
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:crb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    CARUB_v10011435mg
Enzymes [BR:crb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CARUB_v10011435mg
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CARUB_v10011435mg
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
Unknown
AA seq 396 aa AA seqDB search
MPELPEVEAARRAIEDNCIGKKIKRVIIADDSKVIDGISPSDFQNSVLGKTIVSARRKGK
NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL
SFTDKRRFAKVRLLANPTSVRPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGF
ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSITEVIEKAVEVDADSSQFPSNW
IFHDREKKPGKAFVDGKKINFITAGGRTTAYVPELQKLSGKDAEKAAKVRPGKRGVKSKE
DDGDGEEDEQESEKEDGSAKLKKGQKSRGVRGKKPAPKTKTEDSDEEDDDADGGDDSDTE
EKVVKPRGRGTKPAIKRKAEEKPTSQVGKKPKGRKS
NT seq 1191 nt NT seq  +upstreamnt  +downstreamnt
atgccggagcttccggaagtagaggcggcgaggagagctatagaggataattgtattgga
aaaaagattaagcgggtcatcatcgccgacgacagcaaagtgatcgatggaatctcgccg
tccgatttccaaaactcagtcctcggcaagaccatcgtctctgctcgccgaaagggcaaa
aacctctggctcgagttagattccccgccctttccttctttccaattcggcatggctggt
gctatttatatcaaaggcgttgcagttactaagtataaaagatctgctgtcaaggactca
gaggagtggccatctaagtactcaaagttcttcgtcgagcttgatgatggtctggagctt
tcatttactgataagaggagatttgccaaagttcgacttctagcaaatccaacttctgtg
cgtccaatatcagagctcggtcctgatgcattgttggagcctatgactgttgatgaattt
gcagaaagcttagcgaaaaagaaaataaccataaagcctctcctacttgatcagggtttt
atttcaggtattgggaattggattgctgatgaagtgctgtaccaagccagaatccaccca
ttgcagactgcttctagtctctccaaagagcaatgtgaagctttgcacacatccatcaca
gaggtgatagaaaaagcagtggaagttgatgcagacagtagtcagtttcctagtaactgg
atttttcatgatagggaaaagaagccaggaaaagcctttgttgatgggaagaagattaat
ttcatcacagctggtggaaggacaacagcttatgtcccagagctgcagaaactttctgga
aaagacgcagagaaagcagccaaggttagaccgggtaaacgaggtgtgaaatccaaagaa
gacgatggagatggagaagaagatgaacaagaatctgagaaagaagatggcagtgcaaaa
ctgaagaaaggacagaaatcaaggggtgttcgtggtaagaagcctgcaccaaagacaaaa
acagaagatagtgatgaggaggacgacgatgctgatggtggagatgatagtgacactgaa
gagaaagttgtgaaacccagaggtcgtggtacaaagcctgctataaagaggaaagctgaa
gagaaacctactagccaagttggtaagaagccaaagggaagaaaaagttga

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