KEGG T03920: 105317899

Crassostrea gigas (Pacific oyster): 105317899

Entry

105317899         CDS       T03920

Name

(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1

K06754

roundabout, axon guidance receptor 2

Organism

crg Crassostrea gigas (Pacific oyster)

Brite

KEGG Orthology (KO) [BR:crg00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crg04147]
    105317899
   04515 Cell adhesion molecules [BR:crg04515]
    105317899
Exosome [BR:crg04147]
Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105317899
Cell adhesion molecules [BR:crg04515]
Immunoglobulin superfamily
  ROBO family
   105317899

SSDB

Motif

Pfam:

I-set Ig_3 Ig_2 fn3 ig V-set Pur_ac_phosph_N Ig_6 C2-set_2 Ig_C17orf99 Ig_4 Sp38 Ig_5 fn3_2 V-set_CD47 NDNF Homeobox_KN

Other DBs

NCBI-GeneID:

105317899

NCBI-ProteinID:

XP_034300581

Position

LG7:complement(30702867..30757908)

AA seq 1561 aa
MAEFTILLFLFLAVQFICEGASPTDQDAYPQILEHPQNGYLARDNPATLSCQADGKPKPT
ITWYHNGRKVKTMDEDPYSQKMLIEGGKLFFLRVIHQKDKSDAGVYYCNATNILGSAISR
NATLKIAVLRDDFLHSPVNTNASIGGKAKFSCRPPRGEPTPKVLWMKGRKFLTQSNRIQI
SDNGDLIISQVTLNDADKYKCVATNTAGERESAPATLTVLEKPSFRKAPIDQITMEGKAV
HFPCEVVGDTPISVEWRKENVNLQYGRIRVLKDNTLRIEKVEAEDAGLYICMARNSVGTA
EACGQTNCSICTAPSSVSHNPPSFGAKLPASPQGEKTLLFQNTASGRFSVGSDGTLRIER
VQLGDAGQYECEAINGLGSAKALSRLDVKVNDTRPPPIIRIGPQSQNLPTGEVGFLHCEA
YGDPKPQIWWLKDNRPITENSRIISLSSGTLQISDLHESDSGNYTCKASSETGETSQSAT
LLVFIKSNKNVTFHRTQDVKTFPGPPSKPTVVEVLTHSIKLSWQPNNNHGDSPVFAYIVE
YFSHATSEGWVVASDSVPPTNTPGQPTTYTVTNLKPDTTYVFQVRARNSHGIGVPSELSD
PINTFNTDSSHQTKLTREQIQQSLQGIVVELTAVGTTACRCGGQVEGKVISVENVHKMME
IIDKFVIEYREIWDLKTGQTGRMHSVTVSRTALSFTIQNLKSDQWYSICIKAYSQDIPTQ
CSQPMKVQPTELTRQVKFPSQHLSAPSHVVIHKTTDTSISVQWLPPDDAARSGIKSYEIF
CLSNDNKHNCSRSLPANRTSYMLENLKEDQTYTVKIAARTNSGLGFWSKEYVIGPEKENL
MKQPWFIGLLISIIGVTLWFALCIFVVWLCKKRKAMKKQKMQEMYSVPNYSKSDDSNRNS
FNYYAKYGYSQKDVQNRAGGMTQMAPEFAQLLETKDMEMQQQQHGQGPSVYNVPQMKTFY
QKKDPVXAPYATTTLINTSGNAVGGGGHSLQDHMFRPITQHSQQSGSGDSGCCKHECSGD
SNTSHSNTGVPVDHADAMQSPTSDSGSHTTDENGFLLKKGKKPLKQITQPKQAMVNWAEF
LPPPPEHPPPPSEMNMSQHSSGNSSTSQQYAEINCLNREMGARSPMSPMSKISSCSCPVP
HNATPVSGWNMPAYSDTGCVRCCSPKYFENVHYPPNQYNVVQRTQSPRGPEWNNCPRGHD
TWGQRTIACMNPTRGTPTEFKCRTCHSDQEQGGPMPQLQNYKIVPPHCENDYQFLHESEQ
GPPGAYNMPPNFPGHCNVHGGDGGPCGDHTCQSGMNEPCSPVYHNNKMDVHPMNIGVDGY
HRNADSPVSDNGPDYAGESTELETEDENSPKKEGENEEHDDGGNMSGVETWPSYTDQCNT
EDSSEHSSCHSDSDEAFLNEADFASTVAKAAEMSGLTVVGSTVSDPNADKQVVRKQRRHH
RARPTSPYSTDSNFSEVVRKPYPKSQRKKQLMDQGKWPNRKDSPTGSTIQQNQSKYSQHD
SHVPSYNKPNFPNAVPQKACRPKFQPPPSVLKSEDSKDEGQDSGINVEPTSKEGLPGTLK
V

NT seq 4686 nt +upstreamnt +downstreamnt
atggcggaatttaccattctcctgttcttattccttgctgtccagttcatttgtgaaggt
gcctcaccaactgaccaagatgcctatccgcaaattctggaacacccacaaaatggttat
ctagctagagacaaccctgcaaccctgagttgccaagcagacggcaaacccaagcccacc
ataacatggtaccacaatggcaggaaggtgaagaccatggacgaggacccttactcccag
aagatgctgattgagggagggaaacttttcttcctgagggtgattcaccagaaggacaag
tcagatgctggggtctactactgcaatgccaccaacatactgggaagtgccatctccaga
aatgcaacattaaaaatagcagttttgagagatgatttcctacattctccagtcaacaca
aatgcttccatcggcggcaaggccaagttcagctgtaggcctcctaggggcgaaccaaca
cccaaggtcctgtggatgaagggccgaaagtttctgacgcagagcaaccgaattcagata
tctgacaatggcgacctgatcatctctcaggtcacgctgaacgatgcagacaaatacaaa
tgtgtcgccacaaacaccgcaggcgaaagagagagtgctcctgcaacactgacagttctg
gaaaaacccagtttccgtaaagccccaattgaccaaatcaccatggaaggaaaagcagtc
cattttccgtgtgaggtggtaggggacacgcccatttctgtggagtggaggaaagagaat
gtgaatctgcagtatgggagaatcagggtgctgaaggacaatacactgaggatagaaaag
gttgaggcagaggatgcagggttatatatctgcatggcccgtaattctgtggggacagca
gaggcctgtggccagactaactgttcaatatgcactgctccgtcatcggtatcccacaac
ccaccatcatttggagcaaaacttccagcaagccctcagggggaaaagaccctgttattt
caaaacactgcctcagggagattttctgtgggctcggatgggacgttgagaattgagcga
gttcagcttggtgatgctggtcaatacgagtgtgaggccatcaatggactggggtcagcc
aaggctctgtcaaggctagatgttaaagtaaatgatactcgcccacccccaattatcaga
attggcccacagagccagaacctgcccacgggagaggtagggttcctccattgtgaggca
tatggagatcccaaaccccagatttggtggctgaaggacaaccgaccgattacggaaaat
tctagaatcatttctctgagctctggaaccctgcaaatatcagatcttcatgaatcagac
tctgggaactacacttgtaaggcatcaagtgaaactggagaaacatcacagtcagcgaca
ttactggtttttataaagtccaacaaaaatgtgactttccaccggacacaggatgttaag
acatttcctgggcctccttctaagcccactgtagtagaggtcctgacccattccatcaag
ttgtcatggcaaccaaacaacaaccatggagactcgcctgtttttgcttacattgtagaa
tatttcagtcatgcaacatcagagggctgggtcgttgcctcggactctgttcctcccacc
aacacccccggtcagcctacaacttacacggtgaccaatctgaaaccagacaccacctat
gtgttccaggtgcgagccagaaattcccacgggatcggggtacccagcgaactatctgat
cccataaacacctttaacacagatagttctcatcaaaccaagctgacaagggaacagatt
cagcagagtctgcagggaatcgtggtggaacttaccgcagtaggaaccacagcctgccgc
tgtggaggtcaggtggaaggtaaggtcatcagtgtggaaaatgttcacaaaatgatggaa
attatcgacaaatttgtaatcgagtacagagagatctgggacctcaaaacgggtcagaca
ggacgcatgcactcagtgaccgtcagtcgcactgccctatccttcaccatacagaatctc
aagagtgaccaatggtacagcatatgtatcaaggcatatagccaagatataccaacacag
tgtagtcagcccatgaaagttcagcccacagaattaaccagacaagtcaaattcccctcc
cagcatctcagtgccccctcccatgtggtcatccacaaaaccacagacaccagcatctcc
gtgcagtggctaccacctgatgacgccgcacgcagtggaatcaagtcttatgagatattc
tgcttgagtaatgacaacaagcacaactgcagcagaagtctacctgccaatcgcaccagc
tacatgttggagaatctgaaagaggatcagacgtacactgtgaagatagctgccagaacc
aactctgggctgggattctggagcaaggaatatgtcatcgggccagagaaagagaacttg
atgaagcagccctggtttataggacttctgatcagcattatcggtgtcaccctgtggttc
gcgctctgtatctttgtggtgtggctctgtaagaaaaggaaagccatgaaaaagcagaag
atgcaggaaatgtatagtgtacccaactattcaaaatctgatgacagcaatcgaaacagc
tttaattattatgctaaatatggatacagccaaaaagatgtgcagaatcgagcaggaggt
atgacccagatggcacccgagtttgcccagcttttagagaccaaggacatggagatgcaa
caacaacaacatggtcagggccccagtgtgtacaatgtcccccagatgaagacattctac
cagaagaaggacccagtannggctccttacgctaccaccactctgatcaacaccagcggt
aacgcggtgggcggtgggggacactccctccaggaccacatgtttcgtcccatcacccag
cacagtcagcagagcgggtcgggggactcggggtgctgtaaacacgagtgtagcggcgac
tccaacacaagccactcaaacactggagtgccagtggatcatgctgatgccatgcaaagt
ccgaccagtgatagtggaagccataccacagatgaaaacggttttttgttgaagaaagga
aagaagcccctgaaacaaattacccagcctaaacaggccatggtcaattgggccgagttc
cttcctcccccacccgaacaccctcccccgcccagcgaaatgaacatgtctcaacattca
tctggaaactcctccacatctcagcagtatgctgagatcaactgcctgaaccgcgagatg
ggggcccggagccccatgtcccccatgtcaaagatttcctcctgttcctgtcctgtcccc
cacaatgccaccccagtgtcggggtggaacatgccagcatactctgatactggctgtgta
aggtgttgttccccaaagtactttgaaaatgtgcactacccacctaatcagtataatgtg
gttcaaaggactcagtctccgcgaggaccagagtggaataactgtcctcgaggacatgac
acctggggtcagaggacaatcgcatgcatgaaccctacccggggcacgcccacagagttt
aagtgtcgaacatgtcacagtgatcaggaacagggcggtcccatgccccaactccagaat
tataagatcgttcctccccattgtgaaaatgactatcaattcttacatgaatcggagcaa
ggaccccctggggcctacaacatgccccccaatttccctggacactgtaatgtgcatggt
ggggatgggggaccgtgtggggatcatacctgtcagtccggcatgaatgagccctgctcc
cccgtctatcataataacaagatggatgttcacccaatgaacataggagtggatggttac
catagaaacgcagactcacccgtctccgacaatggtccagattacgctggtgagtccact
gagttggagacagaggatgagaactctccgaaaaaggagggagaaaatgaagagcatgat
gacggcggtaacatgtcaggcgtggagacatggcctagttacactgaccagtgcaacacg
gaggacagtagcgagcattccagttgtcatagcgacagtgatgaagcattccttaatgaa
gctgactttgccagcactgttgccaaggcagcagagatgtctgggctaacggtggtcgga
tcgactgtctccgatccaaatgccgacaagcaagtggtgaggaaacagcggcgacaccac
cgtgctcgccccaccagtccttacagcaccgacagcaacttcagcgaggttgtgcgcaaa
ccatatccaaagtcacaacgaaagaagcaacttatggaccaaggaaagtggcccaatagg
aaagattctcccacgggatcgaccatccaacagaaccagtcaaaatattctcaacacgat
agtcatgtaccctcatacaacaaacccaacttccctaatgctgtcccacaaaaagcatgc
cgacccaaattccaacctccgccctctgtcttaaaatcagaggattctaaagacgagggg
caagatagtggaataaacgtagagcccacttctaaagagggactgccaggaacactgaaa
gtttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (82)   

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