KEGG   Crassostrea gigas (Pacific oyster): 105324874
Entry
105324874         CDS       T03920                                 
Name
(RefSeq) macrophage mannose receptor 1 isoform X1
  KO
K06560  mannose receptor, C type
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg04145  Phagosome
Brite
KEGG Orthology (KO) [BR:crg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    105324874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crg04131]
    105324874
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:crg04054]
    105324874
   04090 CD molecules [BR:crg04090]
    105324874
   04091 Lectins [BR:crg04091]
    105324874
Membrane trafficking [BR:crg04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    105324874
Pattern recognition receptors [BR:crg04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   105324874
CD molecules [BR:crg04090]
 Proteins
  105324874
Lectins [BR:crg04091]
 C-Type lectins
  Group 6: Mannose receptor family
   105324874
SSDB
Motif
Pfam: Lectin_C UL45 Chordopox_A33R Podoplanin
Other DBs
NCBI-GeneID: 105324874
NCBI-ProteinID: XP_011422412
Position
LG1:complement(53923289..53955075)
AA seq 1923 aa
MHFKPGSKILICLSVFFLQYFNFVSSTNQNCPLYWTAYGNVCYRFRWVNLKSWVEAKTWC
AAQGGDLLKLENAAEKTYITNAIRNLRQHNHLSTTLKWWTGMNNKNPQSQAWVWGDNSPV
APVIIRSAHLHPSTTDHCVYVSETELRNLQCWQKAAYICERPRGTPLTCDATSRWQQFNN
FCYQVNPTNLQTWAGAVQVCSRNGGDLVEIDNDQDQIAIHDFARNTHKPLWTALHSVQKG
TTNSWQWLNGTVLSTNPSLQYWANGHPPVLRSNAMNNTCVWMNNNQPDYHKSWSTDNCNV
RKGYVCKRPEGVCMPGWVPHQKLCFLFNIRFKYNWFQANNFCRASGGNLVSIYGGTFTNF
VNSYLDELQTAGIDSFWIGLTDNNRTGPWMWTNGGNIAHYQHWPGNHAATNTPNRQDCSF
INTADGNGYWRTTTNCVAQKAFVCQIPMGKQVKPVTTPRPQFKCDGHWVLFNGNCYQFND
TKLTWLNARTTCQGMGADLVTINSANIQSFVQRQSHGNEYWIGLNDRTRERSWQWLDGHT
GSKYYNWNAHEPNNLGTENCVEMNFMNHAGKWNDRRCSTLVRFICQKPASNAQLPVTVST
TPAMPISARCGLNWEEDPNSNNCYQFFDKQLDWSDAREICQSNGGDLASIESQQEQYYVS
AKIRNLNSVAMWIGINDRGTENRFMWTDGSPVAYLHWGNGEPNNYRHNEDCGAIFTTTSY
WNDYPCGNRNGFICKKQSNQRTTTTPPPPVVTKAGYVMGCSAPYKPFQGNCFALFRGRLN
WATAKTRCHYQGANLATINNREEQNFVMTLIPKTGYGYWIGLNDLANEMTFFWSDGSPVL
YTDWAAGEPNNYGRRQEDCVLVLRTNGQWNDAICQNPADGFICKKPMTLMSATPAPEVVG
CTFPSYGYGSFCYRFVYQSKTWKDAQTTCVNAFHGSLAAINDRFTEAFLSAYMSYQTDNY
WIGLSDTQTQGTYRWISGVPVTYSNWIAAHTGNEVGTCVSLTHTHPKGLWQNLNCTEQHH
FVCQYPRQGYTTPQITTAAASLPCPPSYSGYQSYCYKAVALTDSSQWLSFDAARDYCRGV
GGDLVSIHSAGENSFVQNLVGSSPVSIWIGLNDKAVERGHRWTDSSPTDYTNWNRGEPND
AGGIEDCVSMISNGKWNDINCFFSKPFICKVQRGVPLSTTPVIPTASSSNACGTGWVLYN
QFCYYLGNGSSLMTWFDARSTCNQMGAELASVHSRDEDNFLVGQYTRQKGRTDFWIGLND
IEYNNKFVWTDGSVLDFISWGTNEPNDAFAGENCVTMPYWSAGNWNDDNCNMRKNFICKR
PLSGSTKPINQGTTKFIPAGCPNRNFKPVPYTNRCYFIVHSKVNWTSAASACKTAYPGAS
LATISNIHEQEFLTSMLINEDPKLTLWIGLNDQRQSRRFTWADNSPLTYTNWFQGEPNNS
PDGSHMRYNSERCVEMYASRNGAGQWNDKQCSALRNFVCQQHRKAGAPLTSNEGACPDGY
TAYGPSCYRYFPPNAAAPSWSTAQQVCKDNSAQLVEISSVYEDGFVQALVADSAPNGYWI
GLADTTSSGTYTWSQAGWSVTYTNWGAGEPTKGTGEGCVAITNNQWNDTLCNQQLGFVCQ
INHNTPPPTPLPSLVSCDGSAPIGIGLSCYYISGLDTKTWPEASYVCEKKGMELASFHSM
AEMNVIIQKFQNYQPQPGEQAPRFPENIWIGMTKGFSDGFSWRDGSPVNFLNWNKGEPSD
AMSSSQEECVEMYTDSGKWNDVTCFTKRRYVCKKTAQKSTTPFVITSGLPNSGLPTTPFI
VNPPPFGTTPVPTGRATPSKQTLPVITQPQGKGIGNPVAQRQAPPSNNGLSTGGLVGILI
AVIVILALFAFGVIFLKQRQAPPPSSGAGGFENAMYSSAEGAVNIKNSGNVNGGYGGMNE
DDA
NT seq 5772 nt   +upstreamnt  +downstreamnt
atgcatttcaaaccaggatctaagattctcatttgtttgtccgtcttttttctacagtat
tttaatttcgtatcttcgactaatcagaattgtcctctgtattggacggcctatggtaat
gtttgttaccgatttcgatgggtgaatctcaagagttgggtggaggcaaaaacatggtgt
gcagcacaaggaggagacctgttaaagctggaaaatgctgcggaaaaaacgtacattaca
aatgccatccgcaacctcagacaacacaaccacctgagcacgaccctgaaatggtggact
gggatgaacaacaagaacccacaatcgcaggcctgggtgtggggggacaactctccggta
gcacccgtcatcatacgctcagcccatctccacccgtctacgacggaccactgtgtgtac
gtcagcgagacagaactaaggaacctccagtgctggcagaaggcggcctacatctgtgag
agacctagaggaacccctctcacttgtgatgcaacctctagatggcagcaattcaacaac
ttctgctatcaggtcaacccaacaaatcttcaaacatgggcaggagcagtacaagtgtgt
tccaggaatggtggggatttggtggagattgacaatgaccaggaccagatcgcgatccat
gacttcgcgcggaatactcacaaaccattgtggaccgccctacacagcgtacagaagggt
accaccaactcgtggcagtggctgaatgggaccgtactctccaccaaccccagtctgcag
tattgggcaaacggccatcccccagtcctcaggagtaatgcaatgaacaatacctgtgtc
tggatgaacaataatcagccggattatcacaaatcctggtccaccgacaactgtaacgtc
aggaagggctatgtctgcaagagacctgaaggagtgtgtatgccgggctgggtaccccat
cagaaactctgtttcctgttcaacatccggttcaagtataactggttccaggccaacaac
ttctgcagagcctccggaggaaatctggtctcaatatatgggggtaccttcaccaatttc
gtgaattcatacctggatgagttacaaactgcagggattgactctttttggattggtctc
acagacaacaacagaactggtccatggatgtggaccaacggtgggaacatcgctcactac
cagcactggccggggaaccacgccgccaccaacacacccaaccgccaggactgctccttc
atcaacacagctgatggcaatggatattggagaaccaccacaaactgtgtggcccagaag
gcgtttgtgtgtcagattccgatggggaaacaggtcaagcctgtgaccacccctagacct
cagttcaaatgtgacgggcactgggtactcttcaatggaaactgttaccagtttaacgac
accaaactaacctggctaaatgctcgcacgacctgccaggggatgggagcagacctcgtc
accatcaactcggccaacatacagtcctttgtccaaaggcagtcgcatggtaacgagtac
tggatcggactaaacgacagaacacgggaaagatcctggcaatggctggatggacacaca
ggcagtaaatactacaactggaatgcccatgaacccaacaacctggggacagagaactgt
gtggagatgaacttcatgaaccacgccggcaagtggaacgaccgccgctgctccacgctc
gtccgcttcatctgtcagaaaccggccagtaatgcccagctacctgttactgtttcaaca
acaccagccatgccgatcagcgcccgctgcggcctgaactgggaggaagatccaaactcc
aacaactgctaccagttctttgacaaacagctggactggagtgacgccagggaaatttgt
cagagtaatggcggagatctggccagcatcgagtcccaacaggagcagtactatgtgtct
gcaaaaatccgcaatttgaattctgtggcaatgtggattgggattaacgaccgagggaca
gagaacagatttatgtggacggatggttcaccggtcgcctatctacactggggaaatggc
gagcctaacaactaccgacataacgaggactgtggcgccatctttacgaccacgtcctac
tggaacgactacccctgcggtaacaggaacggcttcatctgtaaaaaacaatcaaatcag
cgaaccacgaccactcctccccctccggtggtcactaaggcaggctatgtgatgggctgc
agcgccccctacaaaccgttccagggcaactgcttcgccctgtttcgcgggcgactgaac
tgggccactgccaagacccgctgtcactaccagggggctaacctagcaaccatcaacaat
cgggaggaacaaaactttgtcatgaccctcataccaaaaactggctatggctactggatt
ggactgaacgatttggccaacgagatgacgttcttctggtccgacggcagtccagtgttg
tacacagactgggcggccggagaacccaacaactacggcagacgtcaggaggactgtgta
ctggtgctccgaacgaatggtcagtggaatgatgctatctgccaaaaccctgccgacgga
ttcatctgtaagaaaccaatgaccttgatgtctgccacgccggcccctgaggtcgtgggg
tgtacctttccatcttatgggtatggtagcttctgctacagatttgtctaccaatcaaaa
acatggaaggatgcacagacaacatgtgtcaatgctttccatggatcattggctgccatt
aacgacaggttcactgaggctttcctgtcggcgtacatgtcctaccagacggacaactac
tggatcggactgtctgacacccagacccagggcacctaccgctggatcagcggagttccg
gtcacatacagcaactggattgccgcccacactggaaatgaggtgggaacctgtgtgagt
ctgacccacacccaccccaagggtctgtggcagaacctgaactgtacagagcagcaccac
tttgtgtgtcagtacccccggcagggctacaccaccccccagatcaccactgccgccgcc
agcttgccctgtcccccctcctacagcggctaccagtcctactgctataaggcagtggct
ctgacggactcttcccagtggctgtcctttgatgccgctagggactactgtcgaggggtt
gggggtgacttggtcagcattcacagtgccggagagaactcatttgttcagaatcttgta
gggtcatctcctgtcagtatctggattggattaaatgacaaagctgtagagagaggacac
cgatggacggactccagtcccacagactacaccaactggaaccgtggcgagccgaacgac
gcgggcgggatagaagactgtgtctccatgatcagcaacggcaagtggaacgacatcaac
tgcttcttcagcaaacctttcatctgtaaagtccagagaggggtccctctgtccacaact
cctgtgattcccaccgcttcctcctctaatgcctgcggtacaggatgggtcctctataac
cagttctgttactacctcggtaatggctcctccctgatgacatggtttgatgcacgctcc
acatgtaaccagatgggggcagagctggccagcgtacacagtcgggacgaggataacttc
ctagtgggacagtacacaagacagaaggggaggaccgatttctggataggactaaacgac
attgagtacaacaacaagtttgtatggactgacggtagtgtcctggattttattagctgg
ggaaccaacgaaccgaatgacgcttttgcgggagagaactgtgtcaccatgccatactgg
tctgcaggaaattggaacgatgataactgtaacatgcgtaaaaacttcatctgtaagcgg
ccattgtcaggaagtacaaagccgatcaaccaaggaaccaccaagttcattccagctggc
tgtcccaaccggaactttaaacccgtaccatacacaaatcggtgttacttcattgtccac
agtaaagtcaattggacatcggcagccagtgcctgtaaaacagcctaccccggggcctcc
ctagcaaccatcagtaacatccacgagcaggagtttctgacatccatgctgattaatgag
gacccgaaactgacactctggatcggactcaatgaccagcgacaatcacggaggtttaca
tgggcagacaactctccccttacatacaccaactggttccaaggggaaccaaacaactct
cctgatggctcccacatgcgctataactccgagcgctgtgtcgaaatgtacgcctccaga
aatggggcaggccaatggaatgacaagcagtgcagtgctctacgtaactttgtttgtcag
cagcatcgaaaggctggtgcacctctcacctccaatgaaggcgcatgtccagatggatat
acagcatacgggccaagttgttaccgctattttccaccgaatgccgcggcaccatcatgg
tcgacagctcagcaagtgtgtaaggataacagcgctcagctggtggagataagcagcgtg
tacgaggacgggtttgtgcaggctttggtggcggactcggctcctaacggctactggatc
ggactcgccgacaccacttcctctggaacatatacctggagccaagctggttggtctgtg
acctacactaactggggggcaggagagcctaccaaggggacgggtgaagggtgtgtggcc
atcaccaacaaccaatggaacgatacgctatgtaaccaacagctcggatttgtctgtcag
atcaatcataacacgccccctccaacccctctcccgtccttggtaagctgtgatggatcc
gcccctataggtataggactcagctgttactatatatcgggcctggacacaaagacgtgg
ccagaagccagctatgtgtgtgagaagaagggaatggaactggcaagctttcactcaatg
gcagaaatgaacgtcatcatccaaaaattccagaactatcaacctcagccaggagagcag
gcaccaaggttcccggaaaacatctggatcggaatgactaaagggttctcagatggattt
tcttggcgtgacggctctcctgtgaacttcctgaactggaacaaaggggaaccgtcagac
gcgatgagctcctcccaggaagagtgcgtggagatgtacactgacagcggcaagtggaac
gacgtcacatgcttcacgaagcgccgatacgtctgcaagaaaactgctcagaagagtact
actccgttcgtcatcacatcaggactgcccaattcaggattacctacaacacctttcata
gtgaaccctcccccatttggaaccacccctgtccccaccggtcgtgccacccccagtaaa
cagacactacctgtcatcactcagccccagggcaagggcattggcaacccagtagctcaa
cggcaagccccaccctcaaataatgggctatctaccggaggcctggtcggaatactgatt
gcggtcatcgtcattctggcactgttcgcctttggtgtcatattcttgaaacaacgacag
gctcccccaccaagttctggggctggaggatttgagaacgccatgtactcttcagcagag
ggcgctgttaacattaaaaacagcgggaatgtgaatggagggtatggtgggatgaacgaa
gacgatgcctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (838)   
   KEGG ORTHOLOGY (1)   
   RefGene (834)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (855)   

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