KEGG   Crassostrea gigas (Pacific oyster): 105326176
Entry
105326176         CDS       T03920                                 
Name
(RefSeq) contactin
Organism
crg  Crassostrea gigas (Pacific oyster)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Pur_ac_phosph_N UL45 Lectin_C
Other DBs
NCBI-GeneID: 105326176
NCBI-ProteinID: XP_034306610
Position
LG8:14052065..14091062
AA seq 1246 aa
MSPSKIGLLAALFDLIFKSDPLPLFDCPSEWIEHNLKCYKFVFHPQETYTKAQVFCKENG
GEVLGVESQTEHSFVRNWLLNFDIERNNWYTSGVVPLEQDNFLALESLSNQLSGLIWWSK
FSKLNNSGFHVIYQYNEGQYSLTKGDGSKKYSYTCETAKSEAFRIIQDDRDFTYGTNYPD
EESAPRGPKFYLYPTDTEILGSTSEVYLECAATGLTQPTYQWTVTREDGQTRPIVGPRYI
VTNGRVTISNPQVALDGGSYQCSAKNEFGVVLTPPVVLSFADLGEFSNVDTAPIRPLEYQ
GTVIQCPKISSTSSLSISYNWIKDQTTPINSRLTPYLFISGDGQLYFSEVTRGDNGMYYC
MATLTYPTDRDNYAGSFQSPSRISTGIPLQVQGAPSGILNVQIPDSFIQVFPRQPVVGVD
VRLECFAYGSGPLVYQWFLPTLRDPETRVRFTDSDRVLTIVGVTLQDAGVYTCVCSSRRS
GTRDQKTFHLAIEAKPVFTVPLRDQHADRESELVWRCQAFGIPRPTYTWYWNGQLLSGDS
DLIITGNTLTIPRLGEGQAGMYQCMASNSHGVVTSTAQLRVLSFPPSFKKNPLESTTIGS
LGGSVTILCHPEAAPSPNITWLYEGQVIPGDSGQEGTPAHLQSLTSGHLRIVNLSYTDQG
LYTCKAVNIHGTVQSSTELTVLGRTVMVERPSTVTVVVNGTALLSCRASYSPGLELVYTW
SFNDQSIDPEQDNNFKMRSPFTGDLYIVMTQFRHAGVYTCKASTQLDSVSTSATLSVLGP
PGEPFGVHVVKRQSSIDPYIIHLAWQDGATHGRPVQAYSIFTKSNYSESKWNMIMNIPVN
SVTVEGTLRSVKVLHLSPGSSYRFKVLAVNIYGAGPTSAPSDEYPIPGAAPSKAPANVRR
GEGKVGSLHIVWEPLPPKDQHGWGIGYIVEWRLPRQDVRTEHSWEKELLPGNVSEFVTTI
PGRNQYYVQYEVRVTAYNMFGVGRSSPIQYIHSADDIPVAVPNMVWVEAYNSTALMVHWT
AVPNTRDSMKGRLRGYKVNYWLRYGEDENQATQASFSGQIEQALVIGLLPDTWYYVSVQV
YNDAGNGQKSEKYPQKTFRRAPRMYPTEVHVHSYSSDSVMVSFRGVSTQVEEEPLQGYKI
RVWETFDNSKQVYDIDVGRAVSGIVSGIKRHSVYKIRVLGYSRGGDGAMSSPPTLFTLGG
YIFYDSSSTLVLPAISSATSTVSSSYIEIIVLIRFCFYLITIPFGT
NT seq 3741 nt   +upstreamnt  +downstreamnt
atgtctccaagtaaaataggactgctggctgctttgtttgatttgattttcaagtcggat
ccattgccattgtttgattgcccatcagaatggattgagcataatttaaagtgctacaaa
tttgtatttcatccacaggaaacatatactaaagctcaagttttttgtaaggagaatgga
ggagaagttcttggagtagaaagtcagacagaacactcatttgttagaaactggttgctc
aattttgacatagaaaggaacaattggtatacaagtggagttgttccccttgaacaagac
aatttcctcgctctagagagcctgagcaatcaattaagtggacttatatggtggtctaaa
ttctccaaactgaacaactctggatttcatgtaatttaccagtacaatgagggacaatac
agtttgacaaaaggagatggcagtaagaaatatagctacacctgtgaaacagccaaaagt
gaagcctttagaatcatacaagatgatagggactttacgtacgggacgaactatcctgac
gaggaatcagcacccaggggccccaagttttacctgtaccctactgacacagaaatcctt
ggatccacctctgaggtttatctggagtgtgcagccactgggctcactcagcccacatac
cagtggactgtaaccagggaggatgggcagacccggcccatagtgggccctcgatacata
gtgaccaacggcagagtcaccatcagcaatcctcaagtggcgttagacgggggaagttat
cagtgcagtgctaagaatgaatttggagttgttctgactccacctgttgtgttatctttt
gcagatttaggagaattttccaatgttgatacggcccccatccgtccattggaataccag
ggtacagtgatccagtgtccaaagatttcctcaacatccagtctgtccatcagctataac
tggatcaaggaccaaaccacgcccattaactcccgacttactccgtatctctttatttct
ggagacggccagctttatttctcggaggtgacgcgaggcgataatggcatgtactactgc
atggcgacactgacgtatccgacagaccgtgacaactacgcaggatcgtttcagtctccc
agtcgaatcagtacgggaatacccttacaagtgcagggagctccatcaggaatattgaat
gttcagattcctgacagtttcattcaagtgtttccacggcaaccagtggtgggagttgat
gttagattggaatgttttgcttatggaagtggacctctagtgtaccagtggtttctcccg
accctcagagatccagagaccagggtcaggtttacagacagtgaccgtgtgttgaccatc
gtgggggtcactcttcaggacgccggggtgtacacctgtgtgtgctcaagtcgacggtca
ggaaccagggaccagaaaaccttccatctcgccattgaggcaaaaccagtgttcacagtt
cccctgagggaccagcatgcagacagagaatctgaactggtctggagatgtcaggcattt
gggattccccgacccacctacacctggtactggaacggtcagctgttgtctggggacagc
gacctaattatcacaggaaacaccctcaccattccaaggcttggggagggtcaggccggg
atgtaccagtgtatggccagcaacagccacggggtggtgactagtaccgcccaactcagg
gtgttgtctttccctccctcctttaaaaagaacccactggaatccaccaccattggatca
ctggggggatctgtgaccatcctgtgccacccggaggctgcgcccagccccaacatcacc
tggctgtatgagggacaggtgattccaggtgatagtggacaggaagggacacctgcccac
cttcagtcactgaccagtggtcacctgaggattgttaacctgagctacacagaccagggc
ttgtacacctgtaaggctgtcaatatacatgggacagtacagagctccactgagctgaca
gtgctaggtaggacagtaatggtggagcggccctcaactgttacagtggtggtgaatgga
acagccctgctgtcctgtcgagcttcctacagccccggtctagaactcgtctatacctgg
tcctttaacgaccaaagtatagatcctgagcaggataacaactttaagatgaggagtcct
ttcactggtgatctatatatagtgatgacacaattcagacatgctggagtatacacctgt
aaggcctctacccagctggactctgtcagcacgtcagctacactgtcagttctaggaccc
cctggtgagccctttggtgtccatgttgtcaagagacaatcatccattgatccatacatt
attcaccttgcatggcaagatggggccactcatgggagaccagtgcaggcttactccata
ttcaccaagtcaaattactctgagagcaaatggaacatgataatgaatattcctgtgaat
tcggtgacagtggagggaactttgaggtccgttaaggtcctgcacttgagtcctgggtcc
tcctatcgtttcaaggtcctagccgtcaacatctacggagctggaccaacaagtgcccct
tcagatgagtacccaatcccaggagctgccccttctaaagctccagcaaatgtaagaaga
ggggaaggaaaagtgggaagtcttcacattgtatgggagcccctacccccaaaggaccag
catgggtgggggataggatatattgtggagtggagattaccccgacaggatgtacgcaca
gaacattcttgggaaaaggaactcctgcctggtaatgtgagtgagtttgtgaccactatt
cctgggaggaaccagtactacgtccagtatgaggtccgagtgacggcctacaacatgttc
ggggtggggaggtcctcccccatacagtacatccactcagctgatgacattccggtggct
gtccccaacatggtgtgggtggaggcctacaatagcaccgccctaatggttcactggacc
gccgtccccaacaccagggacagtatgaaaggcagactccggggatacaaggtaaactac
tggttgcggtatggtgaggacgagaaccaggccactcaggccagcttcagtggacagata
gagcaggccctggtcataggtctgctgcccgacacctggtactatgtctctgtacaggtg
tacaacgacgcaggcaacggacagaagagtgagaagtaccctcagaaaacgtttagaaga
gcccccaggatgtaccccaccgaagtgcacgtccactcctacagctctgactcagtcatg
gtcagtttccgtggagtctccacccaagtagaagaggaaccactccaaggatacaagatc
cgagtttgggagacgtttgataactccaaacaagtctacgatatagatgttggccgagct
gtgagtgggattgtgtccgggataaagaggcattcagtctacaagataagggtccttgga
tacagcaggggaggggatggagccatgagttccccgccaacactgttcactctaggtggc
tatattttctacgacagttccagtactttagttctcccagccattagttccgccacatcc
actgtttcttcttcttatatagaaattattgtgttgataaggttttgtttttaccttatt
acgattccttttggaacttaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (46)   

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