KEGG   Crassostrea gigas (Pacific oyster): 105336690
Entry
105336690         CDS       T03920                                 
Name
(RefSeq) valine--tRNA ligase
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    105336690
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:crg01007]
    105336690
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:crg03016]
    105336690
Enzymes [BR:crg01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     105336690
Amino acid related enzymes [BR:crg01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   105336690
Transfer RNA biogenesis [BR:crg03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    105336690
 Prokaryotic type
    105336690
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 tRNA-synt_1g tRNA-synt_1_2 Lebercilin Syntaxin_2 DUF573 Med28 FapA Syntaxin-6_N UPF0242 tRNA-synt_1b
Other DBs
NCBI-GeneID: 105336690
NCBI-ProteinID: XP_011439421
Position
LG7:complement(33106265..33130382)
AA seq 1035 aa
MSASWCYMRKFYTDFSIKLYKPFTVRTSICRYTSCRLCYTDNSNKGVSEKKKVRPQKGAV
TYESATYDIPTQPGDKKDVSCPLPRSYSPDFVEAAWYDWWVAQRFFTPEYGEEKGRPRQK
FVMCLPPPNVTGTLHLGHAITNTIQDALVRWHRMRGYETLWLPGCDHAGIATQVVVEKKL
WKEKRQTRHDIGREAFIQEVWKWKESKGETIYDQLKKLGSSLDWNRACFTLDKNLSEAVT
EAFVKLHDEGLIYRKNKMVNWSCQLQSVISDIEVENIHLSKRTQINIPGYQKKVEFGAMT
SFAYPVVGKDEEIIVSTTRPETMLGDTAVAVHPIDLRYRHLHGCSVLHPIDGRHLPIICD
ESVDIEFGTGAVKITPAHDKIDHDIGRRHGLPSMSVISRSGLMENVGAPYLGMKRFDARK
EVLGDLKRRNLYRGSKSHPMTLPICSRSKNVIEPLEMEQWFVNMEEMSQMGINAVKTKQL
TFVPEYHQKVWFNWLKSADEWCISRQLWWGHRIPAYLAFDKNKGPGKNVWVAARTHQEAI
TKAARLLNLGKEEDVVIKQDEDVLDTWFSSGLFPFSPLGWPNQTDDLNKYYPISLMETGS
DILFFWVARMVMLGMKLTNQLPFSKVLLHGLLRDAHGRKMSKSLGNVIDPLDVISGITLE
DLHKKVEESNLAPHEVETAKEGQRRDFPNGIPACGTDALRFMLCSYNFKDDEIPMNVEHV
QAKRHFCNKIWNGFKFVTSYTDTAVDLRVPLSQGVDVMDKWILSRLSSLVDLCHEGFVSY
DLQFCTKALQNFWVGDFCDIYLEYSKHILSGDNEAHKESTIQLLCLCVDTFLRALSPFMP
YLSEELYQRLLVKDKAVSICVARYPDTTQFPYRDRETEMLVDQVKTIVTQVLSVSSRYSV
RSSLLKVCIRVSPESGLTNPSLVRTVQILTRCQSVEIVVSSNIPADYTVYHLDNQTDVGL
FLKGMIDVNVETDKINQKLGKLEKKFAQLIKTSEKASKMTSEKHQKLQNEISDTEEMIKR
LKDSIKELEAMRDGM
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgtcagcctcctggtgctacatgagaaaattttacacagacttttcaattaagctttac
aagcctttcacagtccgtacatcgatttgtaggtacacctcatgtagattgtgctataca
gacaacagcaacaaaggagtctctgaaaagaaaaaagtccgaccacagaaaggtgcagtt
acttatgaatcagcaacatatgatataccaactcagccaggagacaaaaaagatgtgtct
tgtcctttacccagaagttacagcccggattttgtggaagcagcttggtatgactggtgg
gtcgcccaaagattttttacaccagagtatggggaggaaaagggaagacctcgacagaag
tttgtgatgtgtctcccacccccaaatgtgacagggaccttacatctgggtcatgctata
acaaataccattcaagatgctcttgtcagatggcatagaatgagaggttacgagactctg
tggctcccgggctgtgaccacgcaggaatcgccacacaagtggtggtggagaagaaactg
tggaaggagaaacggcagacgcggcatgacataggccgtgaggcgttcatccaggaagtg
tggaaatggaaagaaagcaaaggagaaaccatttatgatcagttgaagaaattaggatcc
tctttggactggaacagagcttgcttcacccttgataagaatttgtctgaggcagtgact
gaggcctttgtcaagcttcatgatgagggactgatctacagaaaaaacaaaatggtcaat
tggtcttgccagttgcagtctgtgatttcagatattgaggttgagaatatacatttatcc
aagagaacacaaatcaacattcctgggtatcaaaagaaagtggagtttggagccatgacc
tcatttgcatatccagtggtgggcaaagacgaggaaatcatagtttccaccactagacca
gagaccatgcttggtgacactgctgttgcagtacaccccattgatttacgatatcgacat
ttgcatggctgttctgttctccaccccattgatggacgacatcttcccatcatctgtgat
gagagtgttgacattgaatttggaactggagccgtgaagatcactccggcccatgataaa
atagaccatgacattgggcggcgacatggcctgccctcaatgtcagtcatcagtcgctct
ggtctcatggagaatgtcggtgcgccatacctggggatgaaaagatttgatgccaggaag
gaagttctgggggatctaaagaggcggaacctgtaccggggctccaagagtcatcccatg
accctgcccatctgtagtcgttccaaaaatgttattgagcccctggaaatggagcagtgg
tttgtcaacatggaagaaatgtcacaaatgggaatcaatgcagtgaaaaccaagcagctc
acttttgtgccggaatatcatcaaaaagtctggttcaattggctcaagagtgcagatgag
tggtgtatctcccgacagctgtggtgggggcatagaatccccgcctatctagcttttgat
aaaaacaagggtccagggaaaaatgtttgggtggcagcaaggacgcaccaggaggccatc
acaaaagcagctcgattactaaaccttggcaaggaagaggatgttgtcataaaacaagat
gaagatgtactggatacctggttttcctctggattgtttccattctcacctttggggtgg
ccaaatcagacagatgatttgaacaagtactatcccataagtctcatggagacaggaagt
gacattctgtttttctgggttgcaaggatggtgatgttggggatgaaattgaccaatcag
ctaccattttctaaggtgctgcttcatgggttattaagagatgcccatggacggaaaatg
agtaaatctttagggaatgtgatcgatccattagacgtcatatctggtatcactctggag
gacttgcataagaaggtggaggagagcaacttggccccacatgaagtggagacggccaag
gagggtcagaggagggacttccccaacggaatccccgcctgtggcacagatgccctcaga
ttcatgttgtgttcctacaactttaaagatgatgaaatcccaatgaatgtagaacatgtc
caggctaagagacacttttgtaacaaaatctggaacggctttaagtttgtgaccagctat
acagacacagctgtggacctccgtgtccccctgtcccagggggtggatgtgatggacaaa
tggatcctgagtcgcctcagtagtttagtggacctctgccatgagggattcgtgtcttat
gatctacagttttgcactaaagctttacagaatttctgggtgggagatttctgtgatata
tacctggaatattctaagcacattctgagtggtgacaatgaggctcacaaggagagcacc
attcagctactgtgtctgtgcgtggacacatttctgcgggctctcagtcccttcatgccg
tacctgtcagaggaactgtatcagagactgctggtcaaggacaaggcagtcagcatctgt
gtggcccgctacccagacacaacacagtttccatacagagatagggagacagagatgctt
gttgaccaggtaaagactatagtgacccaagttttatctgtctcaagccgctacagtgtc
aggagcagtctcctgaaagtttgcatcagagtgtctccagagagtggcttgaccaatcca
agtctggtccggacggtacagatcctgactcggtgtcagtcggtagaaatcgtagtatcc
tccaacatcccagcagactacactgtgtatcaccttgacaaccaaacagatgtcggccta
tttttaaagggcatgattgatgtcaacgtggaaacagacaaaattaaccaaaaacttgga
aaattagagaaaaagttcgcccaactgataaaaacgtcagagaaagcgtccaaaatgaca
tcagagaaacatcagaaactccaaaacgagatctccgacacagaagagatgataaaaaga
cttaaggacagcattaaagaattggaggctatgcgtgatggcatgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (63)   

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