KEGG   Crassostrea gigas (Pacific oyster): 105338838
Entry
105338838         CDS       T03920                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg03013  Nucleocytoplasmic transport
crg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105338838
   03015 mRNA surveillance pathway
    105338838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crg03019]
    105338838
Enzymes [BR:crg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105338838
Messenger RNA biogenesis [BR:crg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     105338838
SSDB
Motif
Pfam: DEAD Helicase_C
Other DBs
NCBI-GeneID: 105338838
NCBI-ProteinID: XP_011442422
Position
Unknown
AA seq 530 aa
MADLDWGAAVDTQEQTLTSQTTGTGQQSINWAEEVEKSNLTEEINRIAIDKNRSPSKSPS
APSQNAPTQTSHPPAQQGAGAMAAAPPPAQVGAGASGDEDENAATKEDSALLRKLIHSKL
VSTKADLEVLQKDPNSPLYSVKSFEALNLKKELLDGIYSMGYNTPSKIQETALPVLLADP
PVNMIAQSQSGTGKTAAFVLTMLSRVDTNQPYPQCLCIAPTYELALQIGKNVEDMGKFMK
DLQIIYAVRGERLDRGTKLNGHLIIGTPGTVCDWALKLRFFDLKKINVFVLDEADVMIAT
QGHQDQSIRIQRGLRKDCQMLLFSATYEEEVMRFAQAVIPNNPIVIRLRREEQSLDNIKQ
YFIECADAEGKFQALSNIYGSISIGQSMIFCATRRTAAWLAEKMTKEGHAVGLLSGDLSI
EQRAAIINRFKDAKEKVLITTNVTARGIDVEQVTVVVNFDLPLTQDHKPDFETYLHRIGR
TGRFGKKGLAINMVDSRQSFATLKAIEKYFGRKVEKLDAEDMEEVEKIGS
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcagacctagattggggagctgctgttgacactcaggaacaaacactgacaagtcag
accacaggaactggacaacaatccataaactgggcagaagaagttgagaaaagtaactta
acggaagagataaacagaatagcaattgacaaaaacagatccccttccaaatctcccagt
gcaccctcacaaaatgcccccacccagacaagtcaccccccagcccaacaaggggctggg
gcaatggctgctgcccctcccccagctcaggtgggagcaggggcatccggagatgaagat
gaaaatgctgccaccaaagaagattcagccctcctcaggaagctgatccactcaaagctt
gtgtcaacaaaggcagatttagaagttctgcagaaagatcccaattctccactctactct
gttaaatcatttgaagcactaaatctaaagaaggagttattggatggaatctacagcatg
ggatacaacacaccatcaaagatccaggagactgccctaccagtcctgctggctgacccc
cctgtaaacatgattgctcagagccagagtgggacagggaagacagcagcctttgtgttg
accatgttgagtcgagtcgacaccaaccagccctacccgcagtgcctctgtattgctcct
acatacgagctagctttgcaaataggaaaaaatgtagaagatatgggaaagttcatgaaa
gacctgcagatcatctatgcagtcagaggagagcgattggacagaggaacaaaactaaat
ggccatttaatcataggaacccctgggacagtttgtgactgggccctaaagttacggttc
tttgacctcaaaaagatcaatgtatttgtgttggatgaagctgatgtgatgattgctaca
cagggccatcaggatcagtccatcaggattcagaggggtctacgaaaggactgtcagatg
ttgttgttttctgccacatacgaggaggaagtcatgagatttgcacaagctgtgataccc
aacaacccgatcgtcatacgactacggcgagaggaacaatccctggacaacatcaaacag
tacttcatcgagtgtgcggatgcagagggaaagttccaggccctctccaacatctatgga
tccatatcaataggacagtccatgatattttgtgcaactagacgaacagctgcttggctg
gcagagaagatgacaaaggaaggtcacgcagttgggctcctgagtggagatctgtccata
gaacagagggctgccatcattaacagatttaaagatgccaaggagaaagttctcatcacc
accaatgtgacagcaagaggtattgatgtggaacaggtcacagttgttgtgaactttgac
cttcccctgacccaagaccacaaaccagactttgagacgtaccttcacagaataggaaga
accgggcgttttggcaagaagggcttagcaattaacatggtggatagtcgccagtctttt
gctacattgaaagccatcgagaaatattttggtcgtaaagtagagaagctagacgctgaa
gatatggaagaagtggagaaaattggaagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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