KEGG   Crassostrea gigas (Pacific oyster): 105342879
Entry
105342879         CDS       T03920                                 
Name
(RefSeq) histone deacetylase 4 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
crg  Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:crg03036]
    105342879
Enzymes [BR:crg01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105342879
Chromosome and associated proteins [BR:crg03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     105342879
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 105342879
NCBI-ProteinID: XP_011448256
Position
LG9:10781973..10852642
AA seq 1036 aa
MLTKVLPTIQEEFKSRGNGFKQGESLGSSERESEDEIRDPLGSGDTGMDINSHFTPIRKA
EMTQSPLTSPVVERRPIPTNIFNDPHLQQGLAKIKHEQELQHQLLIQHYQQQQHQLAQEH
EKQLQDHIKIRTEEQYFKQLVFMQKQQELLEQQKIKMQEQHRMEKEIMENERLEQIKNKK
DGEQSAVASSEVKARLQNFVLNKKQREASARNSPPALRWGVDQSSPPQGISPPYASHLLG
KYEDFPLRKTASEPNLKVRSALKQKLESQRRITHSPILPRKNKFVKRKPQLSLDCSSNSD
SGPNSPPAGLHASMVNGSMASKEHDGSSYPFSLYRSMVYHANDLYPSPSMPNISLGRPAS
SSGNSSSPEADLRSLNHPPRGLPAHLGGYPIYPVTGHEVDLSNPSNPAFLSAQIKALEEA
RNQAKLGQSIPYSSLQAVPGSAASEARQARIHGRHKPLNRTHSAPLPIGHPFLQQTYLMQ
QAAAAAAATGDHGGNMSSEQIMKDKMFVKQHIRQAVLQRVGSKSHMENVDEETEARLAQE
MRESREQMNEEMRERMEESYIEEKEMQLNLKPRHKGPSHHRPLARTQSSPLVLSIPPPEP
QEPTPISYRYTTGIAYDSIMQKHECTCGNHANHPENAARLQSIWSRLQETGLVNRCEKIK
SRRATIEELQSCHSELHTILYGTNPMHRHRLLDHVQFCILPCGGIGVDSDTVWNEMHTYT
AVRMAAGCVTELALRVANKDLKNGFAVVRPPGHHAEMSTPMGFCYFNSVAIAAKQLKEKS
KVNKILIVDWDVHHGNSTQQNFFNDPNVLYISIHRHDNGNFFPGTGNPTDCGSGDGLGFN
VNIAFGGALNPPMGDAEYLAAFRTILMPIAKEFNPDIVLISAGFDAAIGHPPPLGGYNVS
SACFGHMTRELMSLADGRLVLALEGGYDLPSICDATELCIKALLGDELPPVKEEELCRAP
CKPGQETLEETIKIQAKHWPCVQKYLGTIHYSLMEAQKREMEEADTVTALASLSMVAAKQ
SSMSEESSEPMEEDKS
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgctaacgaaagttctgcccaccattcaagaggagtttaaatctcggggtaacggattc
aaacaaggggaatcactcggttcctccgaaagggagagcgaagatgaaatcagagatccc
ctgggctccggtgacacagggatggacatcaacagtcattttacaccaatacgcaaagca
gaaatgacccagtcccccctaacctcgccggtggtggagcgccgccccatccccaccaac
atcttcaacgacccccacctccagcaaggcctggccaaaatcaagcacgagcaggagctc
cagcaccagttgctgattcagcactaccagcaacagcagcaccagctagcacaggagcac
gagaaacagcttcaggaccatatcaagattcgtacagaggagcagtacttcaagcagttg
gtctttatgcagaagcaacaagagttgctggagcaacaaaaaattaagatgcaggagcaa
catcgcatggagaaagaaataatggagaacgagagactggaacagatcaaaaacaaaaag
gacggagaacagagtgctgttgcttcatcagaggtcaaggccagattgcaaaactttgtg
ctgaacaagaaacagcgtgaagcctctgccagaaactcaccacccgccttacgatgggga
gtggaccaaagttcccctccccagggaatctcccctccctacgcctctcatctcctgggc
aaatacgaggattttccactcaggaaaacagcctccgagccaaacttgaaggtgaggtct
gcgctaaaacaaaaattagaaagccagcgacgaatcacccacagcccaattctaccccgg
aagaacaaatttgtcaaacggaagccccagctttcattggactgcagcagcaactccgac
tccggaccaaactccccacccgctggacttcacgcctcaatggttaatggcagcatggct
tccaaagagcatgatggaagcagctaccccttttcgttgtatcgctccatggtgtaccac
gccaatgatttgtacccatccccatcaatgccgaacatatccctgggacgccccgcatca
tcatctggtaattctagttctccggaggcagatctccgtagtctcaatcatccacctcgc
gggctgcccgcccacctgggcggttacccaatttacccagtcacaggacatgaagttgat
ctctcaaacccctccaaccctgccttcctctcggcccagataaaggcgctagaggaggcc
cgcaatcaggccaaactgggtcagtccatcccatactcctctctgcaggccgtgcctggt
agtgccgcctcagaggctcggcaagctaggattcatgggcgacacaagcccctcaacaga
acccactcagcccccctcccgatcggccaccccttcttacagcaaacctacttgatgcaa
caagcagcggcagccgctgcagcaaccggggaccacggaggcaacatgtcgtccgagcaa
ataatgaaggacaagatgttcgtgaagcagcacatccggcaggcggtgttacagagggtt
ggcagcaagtctcacatggagaacgtggacgaagagaccgaggccagactcgctcaggag
atgcgtgaatctcgggagcagatgaatgaagagatgcgggagaggatggaggagtcgtac
attgaggagaaggagatgcagttgaacctgaagccccgacacaaggggccttcccatcac
cgaccactggcccgcacccagtctagtccgctggtcctgtccatcccaccccccgaaccc
caggaacccacccccatctcatatagatacaccacaggcattgcctatgattcaatcatg
cagaaacacgagtgtacgtgtggtaatcatgctaaccatcccgagaacgccgctcgctta
cagagcatctggtcacgactacaggagacgggcctcgtcaaccggtgtgaaaaaatcaaa
agtcgtcgggcgacgattgaagagcttcaaagttgtcattcggagcttcatacgatacta
tacggcaccaaccccatgcatcgacatagacttcttgatcatgttcaattttgcatactg
ccttgtggaggaataggagtggactctgacacagtgtggaatgaaatgcatacatacaca
gcggtcaggatggctgcaggatgtgtcacagagctagcattaagggttgctaacaaggat
ctgaagaatggtttcgctgtggttagaccccctggacaccatgcggaaatgagcacacca
atgggattctgttatttcaattctgttgccatagcagccaaacagctaaaagagaaatca
aaagtgaacaagatcttgattgtggattgggacgttcaccatggcaactccacccagcaa
aactttttcaatgaccccaatgtgttgtacatatctattcatcgccatgacaatgggaac
tttttccccgggaccggtaatccaacggactgcggatcaggggacggcctcgggttcaat
gtcaacattgcgtttgggggagccctcaatcctcccatgggggacgcagaatacctggct
gcctttagaactattctgatgcctatcgccaaggagtttaaccccgacattgtgttgatt
tcggccggattcgatgcagccattggtcaccctcccccacttggaggttacaatgtctcc
tcagcatgttttggtcacatgacccgtgagttgatgtctctagcagacggtagactggtt
ctggccctagaaggaggttacgacctgccgtcaatctgtgatgccacagaactctgtatt
aaagctcttcttggagatgagctacccccggtgaaagaagaagaattgtgtagagcccct
tgcaaaccagggcaggaaactcttgaggaaacaattaaaatacaggctaagcactggccc
tgtgtccagaaatatttagggaccattcattattcgttaatggaggcgcagaagcgagag
atggaggaagcagacacggttacagcgctggcgtcgttgtcaatggtggctgccaaacag
agcagcatgtccgaggagtcctcagaaccaatggaagaggacaagtcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (2)   
   Pfam (2)   
All databases (85)   

Download RDF
DBGET integrated database retrieval system