KEGG   Crassostrea gigas (Pacific oyster): 105345371
Entry
105345371         CDS       T03920                                 
Name
(RefSeq) homeobox protein Nkx-2.1
  KO
K09342  homeobox protein Nkx-2.1
Organism
crg  Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:crg03000]
    105345371
Transcription factors [BR:crg03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: NKL
    105345371
SSDB
Motif
Pfam: Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 105345371
NCBI-ProteinID: XP_011451803
UniProt: K1R0H9
Position
LG3:16712182..16716263
AA seq 368 aa
MSLSPKQTTPFSVTDILSPIEETYKRTTIEAAIPPLTPYRNHSQYPSPQMGSMSVPVTNP
YHGGYVPQLSHHTPSYTTQFCNGTEFGHYGDPTRHGSSNWYGTNPDPRLAISRLMGGPSS
CAMSSMSSGMHNMNMSALGGLDQHKAGGIQFPITQRRKRRVLFSQAQVYELERRFKQQKY
LSAPEREHLASMINLTPTQVKIWFQNHRYKCKRQLKDAKDKTDSSSPPSSPASSQQDSPR
QPSPRKGAVSVLVKDGKPCSGSGSSEIENSVHQTQSTTNSQTRMNVGRQGSNGSSQLSPH
DQPSKHLSHSMNNCSNSTHNSINSHSSYGGGIHSGLYPSVTMNGGLGSPYGISSRSWIKP
EGNEFYTG
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgtccctcagtccaaaacaaactacaccgttttccgttaccgacatccttagtcctatt
gaagaaacttacaagagaaccaccattgaggccgccatccctcccctcactccatacagg
aatcattcgcagtaccccagtccacagatgggcagcatgagtgtgccggtgaccaaccct
taccacgggggctacgtgccccaactctcccatcacaccccctcctataccacacaattc
tgcaacgggaccgagtttggacactacggggacccgacccgccacggatcctctaactgg
tacgggaccaatccggaccccagactagcaatatctcgcttgatgggtggcccgagttca
tgtgcgatgtcctccatgtcatcaggcatgcataacatgaacatgtcggcactcgggggt
ttggaccagcacaaggcaggggggatccagttccccatcacccagagaaggaaacggcgg
gttctgttttcccaagctcaggtgtacgagctcgagagacggtttaaacaacagaaatat
ctctcggcccccgagagggagcacttagctagcatgatcaatctgacaccgacccaggtc
aaaatctggtttcaaaatcatcggtataagtgcaaacgacagttgaaggacgccaaagac
aaaaccgactcgtcctctcccccctcctcccccgcgtcatcacagcaggactccccgcgc
caaccctcgcccagaaaaggcgccgtttctgtgctagtgaaagacgggaaaccatgttcg
ggatcgggctcatccgaaatcgagaactcggttcatcaaacgcaatcgacgacgaattct
cagacgaggatgaacgttggacggcaggggtccaatggaagctctcaactctcccctcat
gatcaaccatctaaacatttgtctcattccatgaataactgtagcaattctacgcacaat
tccatcaattctcattcgagctatggaggggggatacattcaggactttatccctcagtg
accatgaacgggggcttgggatctccttacggaattagcagtcggtcttggataaaaccg
gagggaaatgaattttacaccggataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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