KEGG   Crassostrea gigas (Pacific oyster): 105346998
Entry
105346998         CDS       T03920                                 
Name
(RefSeq) spermidine synthase
  KO
K00797  spermidine synthase [EC:2.5.1.16]
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg00270  Cysteine and methionine metabolism
crg00330  Arginine and proline metabolism
crg00480  Glutathione metabolism
crg01100  Metabolic pathways
Module
crg_M00034  Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:crg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    105346998
   00330 Arginine and proline metabolism
    105346998
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    105346998
Enzymes [BR:crg01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.16  spermidine synthase
     105346998
SSDB
Motif
Pfam: Spermine_synth Spermine_synt_N Methyltransf_25 BpsA_C RrnaAD MTS Methyltransf_12 Cons_hypoth95 Methyltransf_18
Other DBs
NCBI-GeneID: 105346998
NCBI-ProteinID: XP_011454147
UniProt: K1PM60
Position
LG6:41890100..41901361
AA seq 296 aa
MSCIEDGWFREINEMWSGYCVSLQIEEILHQEKSKFQEILVFKSKSFGNVLVLDGIIQCT
ERDEHAYQEMIAHLPLSCHENPKQVLVVGGGDGGVVREVLKNSCVQRVVLCEIDERVIEV
CKEHLPSMASCLSDPKVTVFVGDGIKYMKEHKGEFDVIITDAPDPIGAAAGLYEESYYAS
MKAALRPSGIICCQGENLYLDLPLVQKLMRICRQNFSAVGYAYTLIPTYTGGHIGFVLTS
TNPDVKFNEPRRIYKESEIKKMKMKYYNSDIHKASFVIPQFAKEALEQVSNGVSDT
NT seq 891 nt   +upstreamnt  +downstreamnt
atgtcgtgcattgaggacggatggtttcgagaaataaatgagatgtggtctggatattgt
gtgtcattgcaaatagaagaaattttacatcaagaaaaatctaaatttcaagaaatactc
gtgtttaaaagcaaatcatttggcaatgttttggtccttgatggcattatacagtgtacg
gagagggatgaacatgcctaccaggaaatgattgcacacctccccttatcttgtcatgag
aatccaaaacaggtgcttgtggtaggtggtggagatggtggggtggttagagaagttctc
aagaacagttgtgtccaacgagtggttctctgtgaaatagatgagcgtgttattgaagta
tgcaaggagcatctccccagcatggcttcctgtctcagcgacccaaaggtgacggttttt
gttggagacggcattaagtacatgaaggagcataaaggggagtttgatgtgataataact
gatgctccagaccccataggtgcagctgcgggtctgtatgaggagtcatactatgccagc
atgaaggcagcactacgccccagtggaattatatgttgtcaaggagagaacctgtacctt
gacctgccattggttcagaaactgatgcggatctgtcgacagaacttctcggccgtggga
tacgcctacactctgatccccacctataccgggggtcacataggatttgttctcaccagt
accaacccagacgttaaatttaatgaacctagaagaatatacaaggagagtgagatcaag
aagatgaaaatgaaatactataactctgacattcacaaggcatcctttgtgattccgcag
tttgctaaggaggctctggaacaagtctccaacggcgtgtcagacacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (46)   

Download RDF
DBGET integrated database retrieval system