KEGG   Crassostrea gigas (Pacific oyster): 105348088
Entry
105348088         CDS       T03920                                 
Name
(RefSeq) glutamate receptor ionotropic, kainate 1
  KO
K05206  glutamate receptor delta-1 subunit
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:crg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    105348088
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:crg04040]
    105348088
Ion channels [BR:crg04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   105348088
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd ANF_receptor SBP_bac_3
Other DBs
NCBI-GeneID: 105348088
NCBI-ProteinID: XP_011455697
Position
LG10:complement(30897544..30906199)
AA seq 800 aa
MICGILVFFLIPTGVCIEEFGIGVFFDLSVWSTDELPSAKVFSIGSTATLIPYEHYFDGN
EVFNITQAVCDMAEKEIVGMVTFTTCKKAAVTAHQANLLNLPHVLVARDNEHCDFPPFIS
SHQTLMVYPDCRLLIKAFVSITLQKAWRSVSVIYDETYGESCINYLVGQLSALSISSNII
KMSETNDADTSLALLIRANDTKLFTMLNGNRTEDLLHQASSVDMFSREYYWIIHYDSKFL
KSSHLLTAMEGGNVLTASFDKRLPDAILSDIISAYGYGLEYMLNHNTTFSIGKYNCDDKK
PSIGEPGLLQIITRNSMQENLENIKWSKDGVLDATVHISSTQAGRNGTLAEVATYNYTDG
FRVKDGRLYQNLFKDFANRTLKVVSWTSTPFTMRKQSTNGQVQYHGFCYDILEEFAKVFN
FRYVMLDSVDGTYGGPTNDGKNGTGMVGMVMRGEADIGVGPFTVTAARETVVDFLTPFQE
EGVGIIMKTKDQKNDRMFRMFLPFQSTSWIATGVSIVITGIILFVISRCSPYTNDADKPI
YKNFWLAFGAFFGQLGGDSTHTSASGRIILGIWWMCTILILELYTANLAAYLTIPPAKSP
IKNLEQLAASSDYKPLVKTGSNLDFLFRRAKGGLYKQIQEKMDQMPVITTTEAGYELVGT
GKYAYMTDVSQLTYKVLKGCHDLLVAEETFNKAGLSFIVRTNAEFKTAFNLHMIRMIEAG
LIAKFHSKWWPRVSECSQDSSKSATALQIDSMAGIFIVYAAFSGLALIFFVSEMVFYFFI
RRQRDTKIKSSEVTNLKQPL
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgatttgtggaattctcgttttctttctcattccaactggtgtctgtattgaggaattc
ggtataggtgtattcttcgatctgtcggtgtggtcgactgatgaactgccttccgccaag
gtgttcagcattggaagcaccgccactcttattccttatgaacattattttgacggaaat
gaagtgtttaatatcacccaagcagtatgtgacatggcggaaaaagaaatagtaggaatg
gtcacctttactacttgtaagaaggctgctgttaccgcccatcaagcaaatttgctgaac
ttacctcatgtccttgtcgccagagataatgaacattgtgatttcccgccattcatctca
tcgcatcaaacgttaatggtttacccagattgccgtctgctgatcaaagccttcgtgtct
attacattacaaaaggcctggagatctgttagcgtcatatatgatgaaacttacggtgaa
tcgtgcattaattacttggtaggccaattaagcgcattgtctatttcatcaaacataatc
aagatgtcagaaaccaatgatgccgacacttccttggctttactaatcagagcaaatgat
acaaaactctttaccatgctgaatggcaacagaaccgaagacttacttcatcaggcatct
tcggttgatatgttcagcagggaatattattggataatacattatgattccaaattcctc
aagagtagccatttgctaactgcaatggaaggtggaaatgttctcactgcttcctttgac
aaaagacttcctgatgctatcttaagcgatattatatcagcctatgggtatggtttggag
tatatgttgaatcacaacacgacattttccattgggaaatacaactgtgatgacaaaaag
ccctcgatcggggaaccgggacttcttcagatcataacacggaattctatgcaagaaaat
ttagaaaatataaaatggtccaaggacggtgtactggatgccacagtacacatttccagc
actcaagccggaagaaacggtactttagcagaagtagcgacctacaactacacagatgga
ttccgagtgaaggatggcagattgtatcagaacttgtttaaggatttcgccaacagaaca
cttaaagttgtgtcttggactagcacgccctttacaatgagaaaacaatcaacaaatggt
caagtacagtaccatgggttctgttatgatatcctcgaagaattcgccaaggttttcaac
tttagatatgtcatgctagattcagtagatggaacttatggagggccaactaatgacgga
aaaaatggaactgggatggttgggatggtaatgagaggggaagcggacattggcgtcggg
cccttcaccgttaccgctgccagggagacagtggtggactttctgactccgtttcaagaa
gagggcgtggggattataatgaagacaaaggaccaaaagaacgatcggatgtttcgaatg
ttcctgcctttccagtccacttcctggatcgccactggcgtctccatcgtgataaccgga
ataattttgttcgtcatctcacgatgtagtccctacaccaatgacgcggataagcctatc
tacaaaaatttctggcttgcatttggtgcttttttcgggcaacttggaggagattccaca
catacatcggcatcggggcgaatcatactgggaatatggtggatgtgcacaatacttatt
ctagaattatacactgcaaacctagcagcttatttgacaattccgcctgccaaatcacct
atcaaaaatctagagcagttggcagcatcgtccgattacaaaccattagtcaaaactgga
tctaatctcgattttcttttcaggagggcaaaaggtgggctatacaaacaaattcaagag
aaaatggaccagatgcctgtgattacaactacagaggccgggtatgaattagtcgggact
ggaaaatatgcctacatgaccgatgtatcacaactaacttataaagtattaaaaggctgt
catgatttactggtagccgaggagacatttaataaggcaggcctatcatttattgtcagg
accaatgctgaattcaaaactgcattcaatttacatatgataagaatgatagaagctgga
ttgatcgccaaatttcactcaaaatggtggccgagagttagcgagtgtagccaggattcc
tcgaagtcggccacagctctacagatcgacagcatggcgggaatattcattgtttatgcc
gcattttctggacttgcactgatattttttgtctcggaaatggtgttttatttcttcatc
cgtcgtcagagggacacgaaaataaaatcatctgaggtcacaaatcttaaacaacctctg
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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