KEGG T01145: ROD

Citrobacter rodentium: ROD_00981

Entry

ROD_00981 CDS T01145

Gene name

ddlB

Definition

D-alanine--D-alanine ligase B (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

cro Citrobacter rodentium

Pathway

cro00473	D-Alanine metabolism
cro00550	Peptidoglycan biosynthesis
cro01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:cro00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:cro00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATPgrasp_Ter CPSase_L_D2 RimK ATP-grasp TTL ATPgrasp_YheCD

Other DBs

NCBI-GI:

283783879

NCBI-GeneID:

8714088

UniProt:

D2TGM9

Position

117994..118914

AA seq 306 aa
MADKIAVLFGGTSAEREVSLNSGAAVLAGLREGGVDAHPVDPKEVDVTQLKAMGFQKVFI
ALHGRGGEDGTLQGLLELIGLPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVALTRA
QFEKGLSEELVTQISALGLPLIVKPSREGSSVGMSKVAEYDALQSALALAFQHDEEVLIE
KWLSGPEFTVAILGEEILPTIRIQPAGTFYDYEAKYLSDETQYFCPAGLETAQEALLRDL
VRKAWSTLGCKGWGRIDAMLDSDGQFYLLEANTSPGMTSHSLVPMAAREKGLSFSQLVVR
ILELAD

NT seq 921 nt +upstreamnt +downstreamnt
atggctgataaaatcgcggtcctgttcggcgggacttccgctgagcgcgaggtgtcgctg
aactccggcgcggcggtgctggccggtttacgtgaaggcggcgtggatgcgcatcctgtc
gacccgaaagaggtggacgtcacgcagctgaaagccatggggtttcagaaggtctttatc
gcgctgcacgggcgcggcggcgaagacggcaccctgcaggggctgctggagctgatcggc
ctgccctataccggcagcggcgtgatggcgtctgccatctcaatggataaactgcgcagc
aaactgctgtggcagggcgctggcttacccgttgcgccgtgggtggcattaacccgtgcg
caatttgaaaaagggcttagcgaagagctggttacgcaaatttccgcgcttggtttaccg
ttaatcgttaagcccagccgcgaaggttccagcgtggggatgtcgaaagtggcggaatat
gacgctttacaaagcgcattagcgctggcatttcagcacgatgaagaagtactgattgaa
aaatggctcagcggaccggaatttaccgtcgcgatactcggtgaagaaattttaccgaca
atccgtatccaacccgccggaaccttctatgattatgaggcgaagtatctctctgatgag
actcagtatttctgccccgccggtctggaaaccgcgcaagaggcgcttttacgtgattta
gtgcgaaaagcatggtccacgctgggctgtaaaggctgggggcgtattgacgccatgctt
gatagcgacggtcagttttatctgctggaagcgaatacctcaccgggtatgaccagccac
agcctggtgccgatggcggcgcgtgagaaagggctgagcttctcgcagctggtggtacgc
attctggaactggcggactga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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