KEGG   Citrobacter rodentium: ROD_00981
Entry
ROD_00981         CDS       T01145                                 
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
cro  Citrobacter rodentium
Pathway
cro00470  D-Amino acid metabolism
cro00550  Peptidoglycan biosynthesis
cro01100  Metabolic pathways
cro01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:cro00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    ROD_00981 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    ROD_00981 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    ROD_00981 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cro01011]
    ROD_00981 (ddlB)
Enzymes [BR:cro01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     ROD_00981 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:cro01011]
 Precursor biosynthesis
  Amino acid ligase
   ROD_00981 (ddlB)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp ATP-grasp_3 ATPgrasp_YheCD TTL ATPgrasp_ST
Other DBs
NCBI-ProteinID: CBG86878
UniProt: D2TGM9
Position
117994..118914
AA seq 306 aa
MADKIAVLFGGTSAEREVSLNSGAAVLAGLREGGVDAHPVDPKEVDVTQLKAMGFQKVFI
ALHGRGGEDGTLQGLLELIGLPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVALTRA
QFEKGLSEELVTQISALGLPLIVKPSREGSSVGMSKVAEYDALQSALALAFQHDEEVLIE
KWLSGPEFTVAILGEEILPTIRIQPAGTFYDYEAKYLSDETQYFCPAGLETAQEALLRDL
VRKAWSTLGCKGWGRIDAMLDSDGQFYLLEANTSPGMTSHSLVPMAAREKGLSFSQLVVR
ILELAD
NT seq 921 nt   +upstreamnt  +downstreamnt
atggctgataaaatcgcggtcctgttcggcgggacttccgctgagcgcgaggtgtcgctg
aactccggcgcggcggtgctggccggtttacgtgaaggcggcgtggatgcgcatcctgtc
gacccgaaagaggtggacgtcacgcagctgaaagccatggggtttcagaaggtctttatc
gcgctgcacgggcgcggcggcgaagacggcaccctgcaggggctgctggagctgatcggc
ctgccctataccggcagcggcgtgatggcgtctgccatctcaatggataaactgcgcagc
aaactgctgtggcagggcgctggcttacccgttgcgccgtgggtggcattaacccgtgcg
caatttgaaaaagggcttagcgaagagctggttacgcaaatttccgcgcttggtttaccg
ttaatcgttaagcccagccgcgaaggttccagcgtggggatgtcgaaagtggcggaatat
gacgctttacaaagcgcattagcgctggcatttcagcacgatgaagaagtactgattgaa
aaatggctcagcggaccggaatttaccgtcgcgatactcggtgaagaaattttaccgaca
atccgtatccaacccgccggaaccttctatgattatgaggcgaagtatctctctgatgag
actcagtatttctgccccgccggtctggaaaccgcgcaagaggcgcttttacgtgattta
gtgcgaaaagcatggtccacgctgggctgtaaaggctgggggcgtattgacgccatgctt
gatagcgacggtcagttttatctgctggaagcgaatacctcaccgggtatgaccagccac
agcctggtgccgatggcggcgcgtgagaaagggctgagcttctcgcagctggtggtacgc
attctggaactggcggactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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