KEGG T01145: ROD

Citrobacter rodentium: ROD_04231

Entry

ROD_04231 CDS T01145

Gene name

ddlA

Definition

D-alanine:D-alanine ligase A

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

cro Citrobacter rodentium

Pathway

cro00473	D-Alanine metabolism
cro00550	Peptidoglycan biosynthesis
cro01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:cro00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:cro00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp CPSase_L_D2 RimK ATP-grasp_3 ATPgrasp_Ter NHase_alpha

Other DBs

NCBI-GI:

283784195

NCBI-GeneID:

8710261

UniProt:

D2TKW3

Position

complement(474479..475573)

AA seq 364 aa
MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFEVVLLGIDKQGQWHVSDAANYLLN
ADDPAHIALRPSATRLAQVPGQHEHQLIDARTATPLPTVDVIFPIVHGTLGEDGSLQGML
RVANLPFVGSDVLGSAACMDKDVTKRLLRDTGLNIAPFVTLSRANRHTFSFADIKARLGL
PLFVKPANQGSSVGVSKVTNEAQYAQAVALAFEFDHKVVVEQGIVGREIECAVLGNDRPQ
ASTCGEIVLNSDFYAYDTKYIDDNGAKVVVPATIDPQINDKIRDIAIQAYQTLGCAGMAR
VDVFLTAENEVVINEINTLPGFTNISMYPKLWQASGLSYTDLISRLIELALERHAADNAL
KTTI

NT seq 1095 nt +upstreamnt +downstreamnt
atggcgaaattgcgggtaggaatcgtatttggcgggaaatcagcggaacatgaggtgtct
ttgcaatcggcaaaaaatattgtcgatgccatcgacaagacccgctttgaggttgtgctg
ttaggtattgataaacaggggcagtggcacgtcagcgatgcggccaactacctgctcaac
gcggacgatcccgcgcacattgcgctgcgtccttccgccacccgtcttgcccaggtgccg
ggtcaacatgaacaccagcttattgatgcccggaccgccacgcccctgccgacagtggat
gtgatattcccaatcgtccacggtacgctgggcgaagatggttcgctacaggggatgctg
cgggtggcgaatctgccgttcgtcggttccgatgtgctgggctcggcggcttgcatggac
aaagatgtgactaaacgcctgctgcgcgacaccgggctgaatattgcgccattcgtgact
ctcagccgggccaatcgccatacttttagctttgccgatataaaagcgcgtctcggcctg
ccgctgttcgtgaagccagccaaccagggctcttccgtcggtgtcagtaaagtgaccaac
gaggcgcagtacgcccaggccgtcgcgctggcgttcgaattcgatcataaggtagtggta
gaacaagggatcgtcgggcgcgaaattgaatgcgcggtgctgggtaacgatcgtccacag
gccagtacctgcggcgaaatcgtgctgaacagcgatttttacgcttacgacaccaaatac
atcgacgataacggtgcgaaagtggtggtgcctgcgacgatcgatccgcagatcaacgac
aagatccgtgatattgccatccaggcttaccagacgctgggctgtgccggtatggcgcgc
gtcgatgtctttttgaccgcggaaaatgaagtggtgatcaatgagatcaacacgctgccg
ggctttaccaacatcagtatgtacccgaaactctggcaggccagcgggttaagctatacc
gatctgatcagccgtttgattgaactggcgctggagcgacacgctgcggataacgcgctg
aaaacgacaatctaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

Download RDF

DBGET integrated database retrieval system