KEGG   Citrobacter rodentium: ROD_20401
Entry
ROD_20401         CDS       T01145                                 
Symbol
dcm
Name
(GenBank) DNA-cytosine methyltransferase
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
cro  Citrobacter rodentium
Pathway
cro00270  Cysteine and methionine metabolism
cro01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cro00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    ROD_20401 (dcm)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cro03000]
    ROD_20401 (dcm)
   03032 DNA replication proteins [BR:cro03032]
    ROD_20401 (dcm)
   03036 Chromosome and associated proteins [BR:cro03036]
    ROD_20401 (dcm)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cro02048]
    ROD_20401 (dcm)
Enzymes [BR:cro01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     ROD_20401 (dcm)
Transcription factors [BR:cro03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    ROD_20401 (dcm)
DNA replication proteins [BR:cro03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    ROD_20401 (dcm)
Chromosome and associated proteins [BR:cro03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    ROD_20401 (dcm)
Prokaryotic defense system [BR:cro02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    ROD_20401 (dcm)
SSDB
Motif
Pfam: DNA_methylase DNA_meth_N
Other DBs
NCBI-ProteinID: CBG88792
UniProt: D2TNU8
Position
complement(2142401..2143834)
AA seq 477 aa
MQQTLSLAGSSSPVTDHSAESLQAMLAKLSEIYDVKTLVAQLNGVGENHWSPAILKRTVA
NASLWHRLSEREAAHLRTLLPTPPVHHPHYAFRFIDLFAGIGGIRRGFEAIGGQCVFTSE
WNKHAVRTYKANYYCDPASHRFNEDIRDITLSHREGISDRQAAEHIRQHVPQHDVLLAGF
PCQPFSLAGVSKKNALGRAHGFACDTQGTLFFDVVRIIDACRPPIFVLENVKNLKSHDGG
KTFRIIMQTLDELGYDVADTDDNGPDDPKIIDGKYFLPQHRERIVLVGFRRDLNLKGDFT
LRDISTRYPQRRTTLAELLEPVVEAKYVLTPVLWKYLYRYAKKHQAKGNGFGYGMVSPSD
PNSVTRTLSARYYKDGAEILIDRGWDFARGEKNFDDPDNQQHRPRRLTPRECARLMGFES
PQEYQFRIPVSDTQAYRQFGNSVVVPVFAAVASLLEEKIKQAVALRQQESACGGRSR
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgcagcaaactctttcattagcaggttcgtcgagccccgtgacggatcacagcgcggaa
tcccttcaggcgatgctggcgaaattatcagaaatttatgatgttaaaacgctggtggcg
cagctaaacggggttggcgagaaccactggagtccggccattttaaaacgcacggtggcg
aatgcatcgctctggcaccggctaagcgagcgcgaagcggcgcatctgcgcactctgctt
cccacgccgcctgttcatcatcctcactacgccttccgttttatcgatctatttgccggc
atcggcgggattcgccgcgggtttgaagcgattggcggccagtgcgtgttcaccagcgag
tggaataaacatgcggtgcgcacctataaagccaactattattgtgacccggccagccac
cgctttaatgaggatattcgtgatatcaccctgagccatcgcgaggggataagcgatcgg
caggctgcggaacatattcgccagcacgtaccgcagcatgacgtgctgctggcgggcttt
ccctgccagccgttttcgctggctggcgtgtcgaagaaaaacgcgctggggcgggcccac
ggcttcgcctgcgatacgcagggaacgctgttctttgacgttgtgcgcatcattgacgcg
tgtcgtccgccgatctttgttcttgaaaacgttaaaaacctgaagagtcacgatggaggg
aaaaccttccgcatcatcatgcagaccctggatgagctgggctatgacgtggcggatacc
gatgataacggacccgacgacccgaaaattattgatggaaaatacttcctgccgcagcac
cgtgaacgtatcgtcctggtcggttttcgccgcgatcttaatctgaaaggcgactttacc
ctgcgcgacatcagtacgcgctacccgcagcggcgcacaacgcttgctgaactgcttgaa
ccggtcgtcgaggctaaatatgtactgacgccggtcctgtggaaatatctctaccgttat
gcgaaaaagcaccaggcgaaaggaaacggctttggctacggtatggtcagtccgtctgac
ccaaacagcgtcacgcgaaccctgtccgcgcgctattacaaagacggcgcggaaattttg
atcgatcgcggctgggatttcgccagaggcgaaaaaaacttcgacgacccggacaatcag
cagcaccgaccgcgccgcttaacgccgcgcgaatgcgcgcggctgatgggctttgaatcg
ccgcaggagtaccagttccgtattccggtctccgacacccaggcctaccgccagtttggc
aactcggtggtcgtgccggtgttcgccgcagtggcgagcctgctggaagaaaaaataaaa
caggctgtcgcgctgcgccagcaagagagcgcctgtggcggacgttcacgataa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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