KEGG   Citrobacter rodentium: ROD_29601
Entry
ROD_29601         CDS       T01145                                 
Name
(GenBank) putative ATP-binding protein of T1SS
  KO
K12541  ATP-binding cassette, subfamily C, bacterial LapB
Organism
cro  Citrobacter rodentium
Pathway
cro02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:cro00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    ROD_29601
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cro02000]
    ROD_29601
   02044 Secretion system [BR:cro02044]
    ROD_29601
Transporters [BR:cro02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC-BAC subgroup
    ROD_29601
Secretion system [BR:cro02044]
 Type I secretion system
  Adhesin protein transporter
   ROD_29601
SSDB
Motif
Pfam: ABC_tran ABC_membrane SMC_N AAA_21 AAA_29 AAA_23 MMR_HSR1 AAA_18 Dynamin_N RsgA_GTPase FtsK_SpoIIIE AAA_15 DUF87 nSTAND1 Peptidase_C39
Other DBs
NCBI-ProteinID: CBG89699
UniProt: D2TJQ8
Position
3137826..3139961
AA seq 711 aa
MDFFSFMENDNDAKQYYLEQWKSALVNIAHHYRLNVSEQNILITSLWHDNESTSKVIEIM
TRRAGLSFKEESVDSSRLNAWLFPQVLEMKDGRLAIIKSIDEDKNFVVSFIDDGDLISLV
QEEQLRQEGRRIITLRPAKNVPDARIDDYIKPTEKYWVWRIIFADMKPYYLVILGSLFVN
ILGLAGITYSMQTYDRVIPAQSYPTMWVLFIGVILALIFDFTLRLIRYSVTDILGKRADL
IISDRVFGRALRIKNPYRPKSTGSFISQLKELEQVREMMTSSTVVAITDLPFFFMFLVII
YFLGGIVFLVPLAGAILMVLPGLMSQKKLFRLANTAMRESSLRNAMLVETVQGLDDIKFL
QAEHRFQQQWLHYIKTTAENSLELKHLTHTLTTWSYFVQSSVFVCLILVGTPFVMSGDLS
TGALVASSILSSRMMAPVAQIANILTRWQQTKVAMTGLDSIMQLPVDQPEHQRLIHKKFI
EGRYSIKNAAFTHHADSQKIAVSIDSLEIKAGERIAILGRNGSGKSSLLNALAGMMCQRS
GDVILDGININDIDPADLRRDIGYLSQNSRLFFGSIRENITLGSPMAQDNDIINAIRLTG
AINFINQLPSGLDYIIQEGGHGLSGGQQQTILLARLVLRNPNIVIMDEPTSSLDDVTENE
FVKNMGNWIAGKTVIIATHRKKILDLVNRTIVLSGGKVVLDKSKSDIIDDM
NT seq 2136 nt   +upstreamnt  +downstreamnt
atggatttcttttcctttatggaaaatgacaatgacgccaaacagtactatctggaacaa
tggaaaagtgcgttagtaaatatcgcccaccattatcgactcaatgtttcagagcagaac
attctgataacatctttatggcatgacaatgagtcaaccagcaaagtcatagaaatcatg
acgcgtcgagccgggctttcttttaaagaagaatcggttgatagctcccggcttaacgcc
tggctatttcctcaggtgctggaaatgaaagatggccgtctggctattatcaaaagcatt
gatgaggataaaaactttgttgtctcgtttattgacgatggcgatctcatctcgttagtt
caggaggagcagctacgtcaagaaggacgccgaatcatcaccctgaggccggccaaaaac
gtccccgatgcccgcattgacgattatatcaagccgacggaaaagtactgggtctggcga
attatttttgcggacatgaagccatactatctggtcatactgggctccctgtttgtcaat
attctcggcctggccggcattacatactcgatgcagacttacgatcgggtcattcctgca
cagtcctatcccacaatgtgggtgctttttatcggcgtgattctggcgctgatttttgat
ttcaccctacgcttaatccgttatagcgtaaccgatattctcggaaaacgcgcggatttg
attatttcagacagggtatttggccgggccctgaggattaaaaacccctaccgtccgaaa
tcaaccggttcatttatttctcagctaaaagagctggagcaggtgcgtgaaatgatgacc
tcttcgacggtcgtcgccattacggatttgccgttcttctttatgttcctggtgattatc
tattttttgggtgggattgtcttccttgtccctctcgctggggcaattctcatggtgctc
cctggcttaatgagccaaaagaaactttttcgcctggctaataccgctatgcgagaatcc
agcctgcgtaatgccatgctggttgaaacagttcaggggctggatgacatcaaattttta
caggctgagcatcgctttcaacagcaatggctgcattacattaagacgaccgctgaaaat
agcctggaactaaagcatctgacccatacattaaccacctggtcttacttcgtgcaaagt
tcggtgttcgtttgcctgatcctggtggggactccctttgttatgtccggcgatctctct
accggtgcattagtcgcctcctcaattctcagttcaagaatgatggcgcctgtcgcgcag
atcgccaatatcctcacccgctggcaacaaaccaaagtggcgatgacaggtctggactcg
attatgcagttacccgttgaccagccggaacatcagagattgatccataagaaatttatc
gaaggcagatattcgattaaaaatgccgcctttacgcatcacgccgatagtcaaaaaata
gcggtgagcattgattcgctggagatcaaagcaggtgagcgcatcgccattcttgggcgc
aacggttcggggaaatcatcgctgttaaacgcgcttgccggaatgatgtgccagaggtcc
ggtgatgtgattctggatggtattaacatcaacgatatcgatcccgccgatctgcgccgt
gatattggatatctgagccagaactcccgcctttttttcggttccattcgggaaaatatt
acgctgggctccccgatggcgcaggataacgatattattaatgccatcaggctcaccggg
gcgattaactttattaaccagctgccatcgggtttagattatattattcaggaaggtggt
cacggtctttcaggcgggcagcagcaaacaatcttactggcaagactggtgctgcgtaat
cctaatattgtgattatggatgaacccacctcctctcttgatgatgttacggaaaatgag
ttcgtcaaaaatatgggcaactggattgctggcaaaacagttattattgccactcatcgc
aagaaaatactggatcttgttaatcggaccatcgttttatctggcggtaaagttgtatta
gataaaagcaagagtgacattattgatgatatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (47)   

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