KEGG   Citrobacter rodentium: ROD_49431
Entry
ROD_49431         CDS       T01145                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
cro  Citrobacter rodentium
Pathway
cro00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cro00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    ROD_49431 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cro01007]
    ROD_49431 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cro03016]
    ROD_49431 (lysS)
Enzymes [BR:cro01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     ROD_49431 (lysS)
Amino acid related enzymes [BR:cro01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   ROD_49431 (lysS)
Transfer RNA biogenesis [BR:cro03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    ROD_49431 (lysS)
 Prokaryotic type
   Other AARSs
    ROD_49431 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: CBG91624
UniProt: D2TSR0
Position
5204030..5205547
AA seq 505 aa
MSEQHAQGADAVADLNNELKTRREKLAGLREQGIAFPNDFRRDHTSDQLHADFDGKENEE
LEALNVEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGIYNEQFKKWDLGD
ILGAKGKLFKTKTGELSVHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKIRSQILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMAELDNFDSAKAIAESIGI
KVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctgaacaacacgcacagggcgctgacgcggtagctgaccttaacaatgaactgaaa
acgcgccgcgagaaactggcaggcctgcgcgagcaggggattgccttcccgaacgatttc
cgtcgcgatcatacctcagaccaactgcatgctgacttcgacgggaaagagaacgaagag
ctggaagcgctgaacgttgaagtctccgttgctggccgaatgatgacccgccgtattatg
ggcaaggcctcctttgttacgttgcaggacgttggcggccgcattcagctgtacgttgcc
cgcgacgatctgccggaaggcatttacaacgagcagttcaagaagtgggacctgggcgat
atcctcggcgcgaagggcaagctgttcaagacgaaaaccggcgagctgtctgttcactgc
accgagctgcgcctgctgaccaaagcgctgcgcccgctgccggacaagttccacggcctg
caggatcaggaagcgcgctaccgtcagcgctatctggacctcatctctaacgatgaatcg
cgtaatacctttaagatccgctcgcagattctggcggggattcgccagttcatggtgggt
cgcggctttatggaagttgaaaccccgatgatgcaggtgattccgggcggggcgtccgcg
cgtccgtttatcacccatcacaatgcgttggatctcgacatgtacctgcgtattgcgccg
gaactgtatctgaagcgtctggtggtcggcggcttcgagcgcgtgtttgaaatcaaccgt
aacttccgtaacgaagggatctccgtacgtcataaccctgagttcaccatgatggaactc
tacatggcgtatgcggactacaaagatctgatcgaactgaccgagtcgctgttccgtacg
ctggcgcaggacgttctcggcaccactcaggttccttacggcgatgaagtcttcgacttc
ggcaaaccgttcgaaaaactgaccatgcgcgaagcgatcaagaagtaccgtccggaaacg
gatatggccgaactggataacttcgactccgcaaaagcgattgctgaatctatcggcatt
aaggttgagaagagctggggtctgggccgtatcgtgaccgagatcttcgaagaagtggcg
gaagcgcatctgattcagccgacctttattaccgagtatccggctgaggtatcaccgctg
gcgcgccgtaacgatgtgaacccggaaattaccgatcgcttcgagttcttcatcggtggt
cgcgaaatcggtaacggctttagcgagctgaacgatgcggaagatcaggcccagcgtttc
caggatcaggttgatgcgaaagcggcgggtgacgatgaagcgatgttcttcgatgaagac
tacgtgaccgcgctggagcatggtctgccgccgacggcgggtctggggattggtatcgac
cgtatggtgatgctgttcaccaacagccacaccatccgcgatgtgatcctgttcccggcg
atgcgtccggttaagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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