KEGG   Chromohalobacter salexigens: Csal_2969Help
Entry
Csal_2969         CDS       T00347                                 

Definition
(GenBank) DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
csa  Chromohalobacter salexigens
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:csa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Csal_2969
Enzymes [BR:csa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Csal_2969
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Csal_2969
DNA repair and recombination proteins [BR:csa03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Csal_2969
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
complement(3308866..3309711)
Genome map
AA seq 281 aa AA seqDB search
MPARTWRGACMPELPEVETTRRGIAPHVEGREIREIIVRQPRLRTPVPDDLADTLVGHRI
GELGRRAKYLLMPVGAGTLLWHLGMSGSLRLARLGDLPRKHDHVDLVLEGGAILRYHDPR
RFGFVDWLQGSPLDDPRLARLGPEPLSPDFDGERLYRLSRKRRVAVKPFLMDNAVVVGVG
NIYASEALFLAGIDPRRAAGRISRERYERLAEAARDVLAAAITQGGTTLRDFVSGTGEPG
YFAQRLNVYGRHDAPCRRCGELLRLVTLGQRASVFCPHCQR
NT seq 846 nt NT seq  +upstreamnt  +downstreamnt
atgccggcaagaacgtggcgaggtgcctgcatgcctgaacttcccgaagtcgagacgacg
cgccgaggcatcgcgccgcatgtcgaggggcgtgaaattcgtgagatcatcgtgcgccag
ccgcgcctgcgcacgccggtgccggacgatctggcggacaccctcgtcggccaccgcatc
ggtgaactcgggcggcgcgccaagtacctgctgatgccggtcggcgcaggcaccttgctg
tggcatctggggatgtccggcagtctgcgcctggcgcgcctcggcgatctgcccaggaag
cacgaccatgtcgatctggtgctggaaggcggtgcgatactacgctaccacgatccgcgc
cgtttcggattcgtggactggctgcaggggtctcccctcgacgatccacgcctggcgcgc
ctggggcccgagccgttgtcgcccgacttcgacggcgagcgtctctaccgcctgtcgcgc
aagcggcgcgttgccgtcaagccgtttctgatggataacgcggtggtggtgggagtcggc
aacatctacgcgagcgaagcgctgtttctcgcgggcatcgatccgcggcgcgcggccggg
cgtatctcgcgcgagcgctacgaacgtctggccgaggcggcgcgcgacgtgctggcggcg
gcgatcacccagggtggcacgaccttgcgcgacttcgtcagcggcaccggcgaacccggc
tacttcgctcagcgcctcaacgtctatggacggcacgatgccccctgtcggcgttgcggc
gagcttcttcgcctggtaacgctgggtcagcgtgccagcgtcttctgtcctcactgtcag
cgttga

DBGET integrated database retrieval system