KEGG   Chlorocebus sabaeus (green monkey): 103220318
Entry
103220318         CDS       T04361                                 
Symbol
MSH6
Name
(RefSeq) mutS homolog 6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab01524  Platinum drug resistance
csab03430  Mismatch repair
csab05200  Pathways in cancer
csab05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    103220318 (MSH6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    103220318 (MSH6)
  09162 Cancer: specific types
   05210 Colorectal cancer
    103220318 (MSH6)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    103220318 (MSH6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csab03400]
    103220318 (MSH6)
DNA repair and recombination proteins [BR:csab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     103220318 (MSH6)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II HORMA MUM1-like_PWWP UPF0524
Other DBs
NCBI-GeneID: 103220318
NCBI-ProteinID: XP_007968896
Ensembl: ENSCSAG00000013583
Position
14:complement(59375602..59400252)
AA seq 1391 aa
MSRQSTLYSFFPKSPALSDSNKASARASREGGRAAAVPGASPSLGEDAAWSEAGPGPRPS
ARSASPPKAKNLNGGLRRSAAPAAPTSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDKSEEDNEIESEEEVQPKTQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKR
KRVVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNSESQAHVSGGGDDSS
RPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQVLK
GMTSESDSIGLTPGEKSELALSALGGCIFYLKKCLIDQELLSMANFEEYIPLDSDIVSTT
RSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCA
PLCSPYAINDRLDAIEDLMVVPDKISEVVELLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGFKSKILKQVISLQTKNPEG
RFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLDYLEKQRN
RIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
LPEDTPPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEEQENGKAYCVLVTGPNMGGK
STLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMVCANSFFPQIRFFERALLLLAHVSLIFFFLKACMVENECEDPSQETITFLYKF
IKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLFREVCLASERSTVDAEA
VHKLLTLIKEL
NT seq 4176 nt   +upstreamnt  +downstreamnt
atgtcgcgacagagcaccctgtacagcttcttccccaagtctccggcgctgagtgattcc
aacaaggcctcggccagggcctctcgcgaaggcggccgtgccgccgctgtccccggggcc
tctccttccctaggcgaggatgcggcctggagcgaggctgggcctgggcccaggccctcg
gcgcgctccgcgtcgccacctaaggcgaagaacctcaacggagggctgcggagatccgca
gcgcctgcggcccccaccagttgtgacttctcaccaggagatttggtttgggccaagatg
gagggttacccctggtggccttgtctggtttacaaccacccctttgatggaacattcatc
cgcgagaaagggaaatcagtccgtgttcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcaaaagacttttaaagccatatacaggttcaaaatcaaaggaagcccag
aagggaggtcatttttacagtgcaaagcctgaaatactgagagcaatgcaacgtgcagat
gaagccttaaataaagacaagattaagaggcttgaattggcagtttgtgatgagccctca
gagccagaagaggaagaagagatggaggtaggcacaacttatgtaacagataagagtgaa
gaagataatgaaattgagagtgaagaggaagtacagcctaagacacaaggatctaggcga
agtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacattggtggc
tctgatgtggaatttaagccagacactaaggaggaaggaagcagtgatgaaataagcagt
ggagtgggggatagtgagagtgaaggcccgaacagccctgtcaaagttgctcgaaagcgg
aagagagtggtcactggaaatggctctcttaaaaggaaaagttctaggaaggaaatgccc
tcagccaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgctttc
tctgcccctcaaaattctgaatcccaagcccacgttagtggaggtggtgatgacagtagt
cgccctactgtttggtatcatgaaactttagaatggcttaaggaggaaaagagaagagat
gagcacaggaggcggcctgatcaccccgattttaatgcatctacactctatgtgcctgag
gatttcctcaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaac
tttgatcttgtcatctgttataaggtggggaaattttatgaactgtaccacatggatgct
cttattggagtcagtgaactggggctggtattcatgaaaggcaactgggcccattctggc
tttcctgaaattgcatttggccgttattcagactccttggtgcagaagggctataaagta
gcacgagtggaacagactgagactccggaaatgatggaggcacgatgccgaaagatggca
catatatccaagtatgatagagtggtgaggagggagatctgtaggatcattaccaagggt
acacagacttacagtgtgctggaaggtgatccctctgagaactacagtaagtatcttctt
agcctcaaagaaaaagaggaagattcttctggccatactcgtgcatatggtgtgtgcttt
gttgatacttcactgggaaagtttttcataggtcagttttcagatgatcgccattgttcg
agatttaggactctagtggcacactatcccccagtacaagtcttatttgaaaaaggaaat
ctctcaaaggaaacgaaaacaattttaaagagttcattgtcctcttctcttcaggaaggt
ctgatacctggctcccagttttgggatgcatccaaaactttgagaactctccttgaggaa
ggatattttcgggaaaagctaagtgatgacattggggtgatgttaccccaggtgcttaaa
ggtatgacttcagagtcagattccattgggttgacaccaggagagaaaagtgaattggcc
ctctctgctctaggtggttgtatcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatattcccttggattctgacatagtcagcactaca
agatctggtgctatcttcaccaaagcctatcaacgaatggtgctagatgcagtaacatta
aacaacttggagatttttctgaatggaacaaacggttctactgaaggaaccctgctagag
agggttgatacttgccatactccctttggtaagcggctcctaaagcaatggctttgtgcc
ccactctgtagcccttatgctatcaatgatcgtctagatgccatagaagacctcatggtt
gtgcctgacaaaatctccgaagttgtagagcttctaaagaagcttccagatcttgagaga
ctactcagtaaaattcataatgttgggtctcccctgaagagtcagaaccatccagatagc
agggctataatgtatgaagaaactacatacagcaaaaaaaagatcattgattttctttct
gctctggaaggattcaaagtaatgtgtaaaattatagggatcatggaagaagtcattgat
ggttttaagtctaaaatccttaagcaggtcatctctctgcagacaaaaaatcctgaaggc
cgttttcctgatttgactacagaactgaaccgatgggatacagcctttgaccatgaaaag
gctcgaaagactggacttattactcccaaagcaggctttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggactacctagagaaacagcgcaac
agaattggctgtaggaccatagtctattgggggattggtaggaaccgttaccagttggaa
attcctgagaatttcaccactcgcaatttgccagaagaatacgaattgaaatctaccaag
aagggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctcataaat
gccgaagaacggagagatgtatcattgaaggactgcatgcggcgactgttctataacttt
gataaaaattacaaggactggcagtctgctgtagagtgtatcgcagtgttggatgtctta
ctgtgcctggctaactacagtcgaggaggtgatggtcctatgtgtcgcccagtaattctc
ttgccagaagataccccccccttcttagagcttaaaggatcacgccatccttgcattacg
aagactttttttggagatgattttattcctaatgacattctaataggctgtgaggaagag
gagcaggaaaatggcaaagcctattgtgtgcttgttactggaccaaatatggggggcaag
tctacactcatgagacaggctggcttattagctgtaatggcccagatgggttgttatgtc
cccgctgaagtgtgcaggctcacaccgattgatagagtgtttactagacttggtgcctca
gatagaataatgtcaggtgaaagtacattttttgttgaattaagtgaaactgccagcata
cttatgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagactataaaa
tgtcgtacattattttcaactcactaccattcattagtagaagattactctcaaaatgtt
gctgtgcgcttaggacatatggtatgtgcaaatagtttttttccacaaattcggtttttt
gagagggcccttctgttgctagcacatgtatcgctaatatttttctttcttaaggcatgc
atggtagaaaatgaatgtgaagaccccagccaggagactattaccttcctctataaattc
attaagggagcttgtcctaaaagctatggctttaatgcagcaaggcttgctaatctccca
gaggaagttattcaaaagggacatagaaaagcaagagaatttgagaagatgaatcagtct
ctacgattatttcgggaagtttgcctggctagtgaaaggtcaactgtagatgctgaagct
gtccataaattgctgactttgattaaggaattatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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