KEGG   Chlorocebus sabaeus (green monkey): 103227911
Entry
103227911         CDS       T04361                                 
Symbol
PDZRN3
Name
(RefSeq) PDZ domain containing ring finger 3
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
csab  Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:csab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csab04121]
    103227911 (PDZRN3)
Enzymes [BR:csab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103227911 (PDZRN3)
Ubiquitin system [BR:csab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    103227911 (PDZRN3)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-TRAF Sina_ZnF zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 Prok-RING_4 Tricorn_PDZ zf-rbx1 zf-RING_6 CEP104_ZnF
Other DBs
NCBI-GeneID: 103227911
NCBI-ProteinID: XP_007983196
Ensembl: ENSCSAG00000011455
Position
22:complement(34325208..34567748)
AA seq 1037 aa
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAYAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQREGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KDNHDGSSSEGIFVSKIVDTGPAAKEGGLQIHDRIIEVNGKDLSRATHDQAVEAFKTAKE
PIVVQVLRRTPRTKMFTPPSESQLVDTGTQTDITFEHIMALTKMSSPSPPVLDSYLLPEE
HPSAHEYYDPNDYIGDIHQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYI
SEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPELQLDE
GWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASVLQQKKHEEDGGTTDTATILSNQHEKDS
GVGRTDESTRNDESSEQENNGDDATASSNPLAGQRKLTCSQDTLGSGDLPFSNESFISAD
CTDADYLGIPVDECERFRELLELKCQVKSATPYGLYYPSGPLDAGKSDPESVDKELELLN
EELRSIELECLSIVRAHKMQQLKEQYRESWMLHNSGFRNYNTSIDVRRHELSDITELPEK
SDKDSSSAYNTGESCRSTPLTLEISPDNSLRRAAEGISCPSSEGAVATTEAYGPAPKNLL
SITEDPEVGTPTYSPSLKELDPSQPLEGKERRASDGSRSPTPSQKLGSAYLPTYHHSPYK
HAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLSSPTPSEPRMEWKVKIRSDG
TRYITKRPVRDRLLRERALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLVKAKEQR
RRREFMMQSRLDCLKEQQAADDRKEMNILELSHKKMMKKRNKKIFDNWMTIQELLTHGTK
SPDGTRVYNSFLSVTTV
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacttgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaagagctcaaccacgtcctaccgctcaagcgccttatcctcaagctggacatc
aagtgcgcctacgcggcgcgcggctgcggccgggtggtcaagctgcagcagctgccggag
cacctcgagcgctgcgacttcgcgcccgcgcgctgtcgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctacccttgacgcacggcgagcagcgcgagggcggccac
tgctgcgcgcgagcgctgcgggcgcacaacggcgcgctgcaggcccgcttgggcgctctg
cacaaggcgctcaagaaggaggcgctgcgcgctgggaagcgcgagaagtcgctggtggcc
cagctggccgcggcgcagctcgagctgcagatgaccgcgctgcgctaccagaagaaattc
accgaatacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aaggataaccacgatggatcatccagtgaaggaatctttgtatccaagatagttgacact
gggcccgcagccaaggaaggaggcctgcaaattcatgacaggattattgaggtcaacggc
aaagacttgtccagagcaactcatgaccaggctgtggaagctttcaagacagccaaggag
cccatagtggtgcaggtgttgagaagaacaccaaggaccaaaatgttcacgcctccgtca
gagtcgcagctggtggacacgggaacccaaaccgacatcacctttgaacatatcatggcc
ctcactaagatgtcctctcccagcccgcctgtgctggattcctatctcttgccagaggag
catccctcagcccatgaatactacgatccaaatgactacattggagacatccatcaggag
atggacagggaggagctggagctggaggaagtggacctctacagaatgaacagccaggac
aagctgggcctcactgtgtgctaccggacggacgatgaagatgacattgggatttatatc
agtgagattgaccctaacagcattgcagccaaggatgggcgcatccgagaaggagaccgc
attatccagatcaatgggatagaggtgcagaaccgagaagaggctgtggctcttctaacc
agtgaagaaaataaaaacttttcattgctgattgcaaggcctgaactccagctggatgag
ggctggatggacgatgacaggaacgactttctggatgacctgcacatggacatgctggag
gagcagcaccaccaggccatgcaattcacagctagtgtgcttcagcagaagaagcatgag
gaagacggtgggaccacagatacagccaccatcttgtccaaccagcacgagaaggacagt
ggtgtggggcggaccgacgagagcacccgcaatgacgagagctcggagcaagagaacaac
ggcgacgatgccaccgcatcctccaacccgctggcggggcagaggaagctcacctgcagc
caggacaccttgggcagcggcgacctacccttcagcaacgagtccttcatctcagccgac
tgcacggacgccgactacctgggtatcccggtggacgagtgcgagcgcttccgcgagctc
ctggagctcaagtgccaggtgaagagcgccactccttatggcttgtactaccctagcggc
cccctggacgccggcaagagtgacccggagagcgtggacaaggagctggagctgctgaac
gaggagctgcgcagcatcgagctggagtgcctaagcatcgtgcgcgcccacaagatgcag
cagctcaaggaacagtaccgcgagtcctggatgctacataacagcggcttccgcaactac
aacaccagcattgacgtgcgcaggcacgagctctcggacatcaccgagctcccggagaaa
tccgacaaggacagctcaagcgcctacaacacgggcgagagctgccgcagtaccccgctc
accctggagatctcccccgacaactccttgaggagagcagcggagggcatcagctgcccg
agcagcgaaggggctgtggcgaccacggaagcctatgggccagccccaaagaatctgctg
tccatcacggaagatcccgaagtgggcacccctacctatagcccctccctgaaggagctg
gaccccagccagcccctggaaggcaaagagcggagagccagcgacgggagccggagcccc
acgcccagccagaagctgggcagcgcctacctgcccacctaccaccactccccatacaag
cacgcgcacatcccggctcacgcccagcactaccagagctacatgcagctgatccagcag
aagtcggccgtggagtacgcgcagagccagatgagcctggtgagcatgtgcaaggacctg
agctcccccaccccgtcggagccgcgcatggagtggaaggtgaagattcgcagcgacggg
acgcgctacatcactaagaggcccgtgcgggaccgcctgctgcgggagcgcgccctgaag
atccgggaagagcgcagcggcatgaccaccgacgacgacgcggtgagcgagatgaagatg
gggcgctactggagcaaggaggagaggaagcagcacttggtgaaggccaaggagcagcgg
cggcggcgcgagttcatgatgcagagcaggttggattgtctcaaggagcaacaagcagcc
gacgacaggaaggagatgaacatcctcgaactaagccacaaaaagatgatgaagaagagg
aataaaaaaatcttcgataactggatgacgatccaggaactcttaacccacggcacaaaa
tccccggacggcactagagtatacaattccttcctatcggtgactactgtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (17)   
   Pfam (17)   
All databases (37)   

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