KEGG   Camelina sativa (false flax): 104708803
Entry
104708803         CDS       T05044                                 
Name
(RefSeq) cell division control protein 48 homolog E-like
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
csat  Camelina sativa (false flax)
Pathway
csat04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104708803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104708803
   03009 Ribosome biogenesis [BR:csat03009]
    104708803
   04131 Membrane trafficking [BR:csat04131]
    104708803
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csat04147]
    104708803
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     104708803
Ribosome biogenesis [BR:csat03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    104708803
Membrane trafficking [BR:csat04131]
 SNARE
  SNARE associated proteins
   Others
    104708803
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    104708803
Exosome [BR:csat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104708803
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_2 CDC48_2 AAA_5 AAA_22 AAA_14 AAA_33 TIP49 RNA_helicase AAA_18 AAA_17 AAA_28 nSTAND3 Mg_chelatase ATPase_2 Parvo_NS1 IstB_IS21 AAA_7 ABC_tran Zeta_toxin Viral_helicase1 NACHT Vps4_C AAA_24 NB-ARC TsaE DUF815 Rad17 ATP-synt_ab UFD1 Zot
Other DBs
NCBI-GeneID: 104708803
NCBI-ProteinID: XP_010423732
Position
8:26548511..26552080
AA seq 810 aa
MSNKPESSDSKPKKEDFSTKILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD
TILVKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH
ILPVDDTVEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEFCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRLNI
FKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERKRSAN
PEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFD
QTATGRTTGTAAADPFATSAAAADDDDLYN
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgtctaacaaacccgaatcatccgactcgaaacctaagaaggaggatttcagtactaag
attctcgagaggaagaagtctcccaaccgacttgttgttgatgaagctattaatgatgac
aactctgtcgtctctctccatcctgccaccatggaaaagctccagcttttccgaggcgat
acaattctcgtcaagggtaagaagaggaaggacactgtgtgcattgcccttgctgatgaa
acatgtgaggaacccaagatcagaatgaataaggttgtaaggtctaacttgagggttagg
ctgggagatgttatttctgttcaccaatgccctgatgtcaagtatggaaaccgtgtccac
atattgcccgttgatgatactgttgaaggtgttactggaaacctttttgatgctttcctt
aaaccttacttcctggaggcttaccgcccagtgaggaagggagatcttttcctagtaaga
ggaggaatgaggagtgtggagttcaaagtgatcgagactgatcctggtgagttctgtgtg
gtggctccagatacagagatcttctgtgagggtgaacctgttaagagggaagacgaagaa
aggcttgatgaggttggttatgacgatgttggtggtgtcaggaaacagatggctcagatt
agggaattggttgaacttcccttgaggcatccacaactctttaaatcaattggtgtgaag
ccaccaaagggtattctgctatacggacctcctggatccgggaagactcttatcgctcgt
gctgtggctaatgaaaccggagcgttcttcttctgtatcaatggaccggaaatcatgtcg
aaactggctggtgagagtgagagcaacctcagaaaagcatttgaggaggctgagaagaat
gccccttctatcatattcattgatgagattgactctatcgcaccaaaaagagacaagacg
aatggagaggttgagaggaggattgtctctcagctccttacgcttatggatggtctgaaa
tctcgtgctcatgttattgttatgggagcaacaaatcgccccaacagtattgatccagct
ttgagaaggtttggaagattcgacagggagattgatatcggtgttcccgatgaaattgga
cgtcttgaagttcttaggatccacacgaagaacatgaagctagctgaagatgtggatcta
gaaagaatctccaaggacacacatggatatgttggagctgatcttgcagctctatgtacc
gaagctgcccttcaatgtatcagagagaagatggatgtgattgacttggaagatgactct
attgatgccgaaatcctcaattccatggcggtgtctaatgaacacttccacaccgctctt
ggaaacagcaacccatccgcacttcgcgaaactgttgttgaggttccaaatgtctcctgg
gaggatattggaggtcttgagaatgttaagagagagcttcaggagactgttcaataccct
gtggagcatccagagaagttcgagaagtttggaatgtctccatcaaagggagttcttttc
tacggtcctcctggatgtgggaaaacccttttagccaaagctatagcaaacgagtgccaa
gcaaacttcatcagtgtcaagggaccggagcttctcactatgtggtttggagaaagtgaa
gccaacgtccgtgaaatatttgacaaggctcgtcaatctgctccttgtgttctgtttttc
gatgaactcgactccattgctactcagagaggaaacagtgtgggtgatgcaggcggtgca
gctgatagagtgttgaatcagcttctgacagaaatggatggaatgaacgcaaagaagacg
gtattcattattggagcaactaacagacctgatatcattgatccagctcttcttcgacct
ggaagactcgaccaacttatctacattcctctacctgatgaagattcacgtctcaatatc
ttcaaggcctgcttgagaaaatctcctgttgctaaagatgtagatgtgactgcactcgct
aagtacacccagggattcagtggtgctgatatcactgagatctgccagagagcttgcaag
tacgccatcagagaaaacatcgaaaaggatattgagaaagagcgtaaaaggagcgcgaat
ccagaagcaatggaggaagatatggttgatgatgaagtatcagagattagagcggctcat
ttcgaagagtcgatgaaatatgcaaggagaagtgtgagtgatgctgatattcgcaagtac
caagcttttgctcagacgctgcagcagtcgagagggtttggatctgagttcaggtttgac
caaaccgctaccggacgcactactggtactgcagccgctgatccctttgccacttctgcc
gctgcagctgatgacgacgatctctacaattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (35)   
   Pfam (35)   
All databases (50)   

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