KEGG   Camelina sativa (false flax): 104711301
Entry
104711301         CDS       T05044                                 
Name
(RefSeq) histone deacetylase 7
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03082  ATP-dependent chromatin remodeling
csat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104711301
   03083 Polycomb repressive complex
    104711301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104711301
Enzymes [BR:csat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104711301
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104711301
   HDAC complexes
    Sin3A-HDAC complex
     104711301
    BRAF-HDAC complex
     104711301
    REST complex
     104711301
    SHIP complex
     104711301
    MiDAC complex
     104711301
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104711301
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104711301
  Chromatin remodeling factors
   NuRD complex
    104711301
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104711301
NCBI-ProteinID: XP_010426293
Position
9:complement(18366298..18368105)
AA seq 425 aa
MASLASGPDGGKRRVSYFYEPKIGDYYCGVNQPTKPQRIRVTHNLVLSYNLHRYMEINRP
DLAAASDFEKYHSPEYVEFLKSVTPETLDDPSVSQNLKRFNVDVDWDGPVFHNLFDYCRA
YAGGSISAAAKLNRQEADIAINWAGGMHHAKKDKASGFAYVNDVVLGILELLKAFKRVLY
IDIGFGHGDGVEEAFKDTDRVMTVSFHKTGDTGDICDFGEGKGQYFSLNAPLKDGLDDFS
LRSLFVPVIHRAMEIYQPEVIVFQSGTDSLVGDPLCTFNLSIKGHGDCLQYVRSLNVPLL
VLGGGGSTIPNVARCWCYETAIAVGEQLDNDIPANEYMKYYRPDYKLHILPTNRQNLNTP
GDIMTMRDKLLAQLSQVMHAPSVQFHDTPSSSSQATEAAEVDMEKRQNPLILSGNPCYES
DCNED
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcgagcttagcgtcaggtcccgacggaggaaaacgccgcgtgagctacttctacgag
ccaaagatcggcgactactactgtggcgtcaaccagccaacgaaacctcaacggatccgt
gtcactcacaacctcgtcctcagctataacctccaccgctacatggaaatcaaccgccca
gaccttgccgctgcttccgatttcgagaaataccactcgccggaatatgtcgagttcctt
aaatccgtcacgccggaaaccttagacgatccttccgtctctcaaaacctcaagcgcttc
aacgtcgatgttgattgggatggtcctgtcttccataacctcttcgattactgccgcgct
tacgctggtggttctattagcgccgccgcgaaactgaaccgtcaggaagctgatatcgcc
atcaactgggccggtgggatgcaccatgcgaagaaagataaggcttctggctttgcctat
gtcaatgatgttgttcttgggattctcgagttgctcaaggctttcaagagagttctgtac
atagatattggctttggtcatggggatggagtggaagaagcatttaaggacactgataga
gttatgactgtttctttccacaaaactggggacaccggagacatatgtgactttggggaa
gggaaaggacaatacttttctctgaatgcgccactaaaggatggtttggatgatttcagt
cttcgtagtttgttcgtacctgttatccacagggctatggaaatctatcagccagaagta
attgtttttcagagtggtactgattcattagttggtgatccgttgtgtacattcaacttg
tctatcaagggtcatggtgattgcctacagtacgtgagatctttgaatgttcctctcttg
gtcttgggtggtggaggttctactattccaaatgttgcccgttgctggtgctatgagaca
gctattgcggttggagaacagcttgacaatgatatcccagccaatgagtacatgaagtat
taccgtccagattacaagcttcacatattgccaaccaacaggcagaatttaaacacacca
ggagatattatgacaatgagggacaaattactagcgcaactttcacaagtgatgcacgca
cctagtgtacagtttcatgacactccatcatcaagcagtcaagccactgaagcggctgaa
gtagacatggagaagagacagaatccactcattttgagtggcaatccatgttatgaatca
gattgtaacgaggattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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