KEGG   Camelina sativa (false flax): 104712317
Entry
104712317         CDS       T05044                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csat04131]
    104712317
   04121 Ubiquitin system [BR:csat04121]
    104712317
Enzymes [BR:csat01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104712317
Membrane trafficking [BR:csat04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    104712317
Ubiquitin system [BR:csat04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104712317
SSDB
Motif
Pfam: zinc_ribbon_9 zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-RING_UBOX zf-C3HC4 zf-RING_11 zf-RING_5 zf-C3HC4_3 Rad50_zn_hook zf-ANAPC11 zf-Nse zf-C3H2C3 CxC4 DUF5427 DZR_2 HypA
Other DBs
NCBI-GeneID: 104712317
NCBI-ProteinID: XP_010427489
Position
9:26077019..26079396
AA seq 330 aa
MSSVRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDLGPSSPFDMLRAQRDVERDPTF
DLMEAFSAFMRTRLAERSYEREITGRLGGSAAGSESFSNLAPLLIFGGQAPFRLAGGDNN
HSVEAFVNGAAPGIGITRGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPT
IKITQKHLKSSDSHCPVCKDEFELKAEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRKELP
SRGSSSSTQSNQNRSTSGRENNRRRNIFSNLWPFRSSSSSSGQNRRETNNTATAEEGHYH
HHHQQQQQQHQHQHHQQQSHMGYSGWPFDY
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtcaagtgttcgaaatacccattggtgtcacagatgtcagcgtgctgtttggcttcga
gctcgagatgctgtctgttcgtattgtggaggaggatttgttgaggaaatcgatcttgga
ccgagtagtccctttgatatgcttagagctcaaagggatgttgagcgtgatccaaccttt
gatctcatggaagctttctctgcttttatgagaacccgcttagctgaaagaagctatgaa
cgagaaatcaccggaagacttggtggctctgcagccggttctgaaagcttttcaaactta
gctcctctattgatctttggtggtcaagctccctttagattggctggtggagataataat
cattcagttgaagcttttgtcaatggtgcagcacctggaattggtatcacacgtggcacc
aacgctggagactatttcttcggtcctggtcttgaagaactgatcgaacagctttcatct
ggcactcatcatcgaggtccaccaccagcaccaaaatcatcaattgatgcattgccaacg
atcaagatcacacagaagcatctcaagtcatcagactctcactgcccggtttgcaaggac
gagtttgaactgaaagcagaagcaaaacagatgccgtgtaaccacatctatcattctgac
tgcattgtcccgtggctggttcagcataactcatgcccagtctgccgtaaagagttacca
tcaagaggatcttcttcaagcacacagagtaatcagaacagaagcaccagtggaagagaa
aacaacagaagaaggaatattttctctaacctctggccattccgctcgtctagctcaagc
tcgggtcaaaaccgtagagaaacaaacaacacagcgactgcagaagaagggcactatcat
catcatcaccagcagcaacaacaacaacatcaacatcaacatcatcaacaacagtcccat
atgggttacagtggatggccttttgactattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (17)   
   Pfam (17)   
All databases (31)   

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