KEGG   Camelina sativa (false flax): 104747329
Entry
104747329         CDS       T05044                                 
Name
(RefSeq) nuclear cap-binding protein subunit 1
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03015  mRNA surveillance pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104747329
  09122 Translation
   03013 Nucleocytoplasmic transport
    104747329
   03015 mRNA surveillance pathway
    104747329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104747329
   03041 Spliceosome [BR:csat03041]
    104747329
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     104747329
Spliceosome [BR:csat03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    104747329
SSDB
Motif
Pfam: MIF4G_like MIF4G MIF4G_like_2
Other DBs
NCBI-GeneID: 104747329
NCBI-ProteinID: XP_010467253
Position
15:22561816..22567984
AA seq 849 aa
MSNWKTLLLRIGEKGPEYGTSSDYKDHIETCFGVIRREIERSGDQVLPFLLQCAEQLPHK
IPLYGTLIGLLNLENEDFVRRMVESVQVDFQDALDSGNCNSIRILLRFMTSLLCSKVIQP
ASLIVVFETLLSSAATTVDEEKGNPSWQPQADFYVICILSSLPWGGSELAEQVPDEIERV
LVGIQAYLSIRKNSSTSGLNFFHNGEFESSLVEKDFVEDLLDRIQSLASNGWKLDSVPRP
HLSFEAQLVAGKFHELRPIKCMEQPSPPSDHSRAYSGKQKHDALTRYPQRIRRLNIFPAN
KMEDVQPIDRFVVEEYLLDVLFYLNGCRKECASYMANLPVPFRYEYLMAETLFSQILLLP
QPPFKTLYYTLVIMDLCKALPGAFPAVVAGAVRALFEKISDLDMESRTRLILWFSHHLSN
FQFIWPWEEWAYVLDLPKWAPKRVFVQEVLQREVRLSYWDKIKQSIENASALEELLPAKA
GQNFMYSLEEGSKEKTEEQKLSAELSKKVKEKQTARDMMVWIDEMIYPVHGFEVTLSVVV
QTLLDIGSKSFTHLVTVLERYGQVFAKLCPDSDKQVMLLSQVSTYWKNNVQMTAVAIDRM
MGYRLVSNQAIVRWVFSPENVDQFHVSDQPWEILGNALNKTYNRISDLRKEILNITKNVL
VAEKASANARVELEAAESKLSLLEGEPVLGDNPAKMKRLKSTVEKTGEAELSLRESTEAK
EALLNRALSETEVLLLLLFQSFLGVLKERLPDSTKVRSVQDLKSIGAEDDKSSAMEVDSE
NGNPKKSCEVGEREQWSISTLGYLTAFTRQYASEIWPHMEKLESEVFSGGDVHPLFLQAI
SSALQFPLQ
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgagcaattggaaaacccttctccttcgcatcggcgaaaagggtcctgagtacggcact
tcctccgactacaaagaccatatcgagacttgttttggtgttattaggagagaaatagag
cgttctggagaccaagttttgccttttctacttcaatgtgctgaacaattgcctcacaag
attcctttgtatgggactttgattggtttgttgaacttggagaatgaagattttgttcgg
aggatggtagaaagtgtccaagttgatttccaggacgctttagattctggcaactgcaac
agtatccgtatattgcttcgctttatgacttccctgttgtgcagtaaggttattcaacct
gcttctttgattgtcgtgttcgaaacattgttatcatcagctgccaccacagtggatgaa
gagaaaggaaatccatcatggcaaccacaagctgacttctacgtcatatgtatcttgtcc
agccttccatggggaggatcagaactcgctgagcaagttcctgatgagattgaaagagtg
ttagttgggatacaagcttatttgagcatccgaaagaattcttccacctctggattaaac
tttttccacaacggagaatttgaaagtagccttgtagagaaggatttcgtggaggatcta
ttggatcgaatacagtctctggcttccaatggatggaaacttgatagtgtacctaggcct
catctctcattcgaagcccagcttgttgctggaaagtttcatgagctacgccctattaaa
tgtatggaacagccgagtccaccttctgatcattcgagagcatacagtggcaagcaaaag
catgatgcattgacaagatatccccagagaattcgtaggttgaatatattcccagctaat
aaaatggaggatgtacaacctattgatcgctttgttgtggaagagtatttgctggatgtg
ctcttctatttaaatggatgccggaaggagtgcgcgtcttacatggctaatcttcctgtt
ccttttcggtacgagtatcttatggcagagacactattttctcagatactgctgctaccg
cagccaccattcaagactctttattatacactcgtgattatggatctttgtaaggctctt
ccgggtgcctttcctgctgttgttgctggtgctgttcgtgcactatttgagaaaatttcc
gacttagacatggaatccaggacgcgccttatcctatggttttctcaccacttatccaac
ttccaattcatctggccgtgggaagagtgggcttatgttttggaccttcccaaatgggcc
cctaagcgtgtgtttgttcaggaggttttgcagagagaagtgcgcttgtcttactgggat
aaaattaagcagagcattgaaaatgcgagtgcccttgaagaattgcttcctgcaaaggct
ggtcagaattttatgtattccctggaagagggtagtaaagagaaaacagaagaacagaaa
ttgtcagccgaattgagtaagaaggtcaaagaaaaacaaactgcacgtgacatgatggtg
tggattgacgaaatgatatatccagttcatggttttgaagtcactctttcagtagttgta
caaactttacttgacatcggatcaaaaagtttcactcatttggtcactgtcctggagcga
tatggccaagtatttgcaaaactttgtcctgatagtgataaacaggtgatgctattatct
caagtgagtacatactggaagaacaatgtacaaatgacagcggtggcaattgataggatg
atgggttatagactagtgtctaatcaggcaattgttagatgggtgttctctccagaaaat
gttgatcaatttcatgtgtctgatcagccgtgggagatacttggcaatgctcttaacaag
acttataatcgtatctctgatttaaggaaagaaatattaaacattacgaaaaatgttttg
gtagctgagaaagcttcagcaaacgcacgagtagagttggaggctgctgagagcaaactc
tccctacttgagggtgagcccgtgcttggtgacaatccagcgaagatgaagcgtttgaaa
tcaacagtggagaagacaggagaggcggagttatctcttcgggagtccaccgaggcaaaa
gaggcccttcttaacagagctctctctgaaaccgaggttctactgctcctgctgttccaa
agtttcttgggtgtgttgaaggaacggctcccagattcaacaaaagtgagatcagtgcag
gatctaaaatctataggtgcggaagatgacaagtcatcggcgatggaggtggacagtgag
aatggaaacccaaagaagagttgtgaagtcggtgagagagaacagtggtccatatcaaca
cttggctatctcacagcgttcacaaggcaatatgcgagtgagatatggcctcacatggag
aagttggagtcggaggtgttctctggtggagatgtgcatcctctttttcttcaagccata
tcttctgcacttcagttccctttacaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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