KEGG   Camelina sativa (false flax): 104761668
Entry
104761668         CDS       T05044                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104761668
  09122 Translation
   03013 Nucleocytoplasmic transport
    104761668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104761668
   03041 Spliceosome [BR:csat03041]
    104761668
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104761668
Spliceosome [BR:csat03041]
 Complex C
  Other components
   EJC/TREX
    104761668
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104761668
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 Nup160 CNH PROPPIN IKI3 MMS1_N
Other DBs
NCBI-GeneID: 104761668
NCBI-ProteinID: XP_010483079
Position
18:complement(14623971..14626590)
AA seq 314 aa
MEETIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE
LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQAELSGENINITYKPDGT
HVAVGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSL
KPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISF
NYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNPKYN
TDEGVFRIFGFDST
NT seq 945 nt   +upstreamnt  +downstreamnt
atggaggagacgattccttttaagagcttacatagccgagaatatcaaggtcacaagaag
aaggtacattcagtagcttggaattctaacggaacaaagcttgcttcgggttctgttgat
caaacggctcgtatttggaacatcgaacctcacggtcatagtaaagctaaggaccttgaa
ttaaaggggcatactgatagtgtggatcagctatgttgggatcccaaacattcagatctt
gttgctactgcctctggggataaaagcgttcgtctctgggatgctcgcagtggaaaatgt
acacagcaggcagaacttagtggagagaatataaatattacctacaaacctgatgggaca
catgttgctgttggtaatagggatgatgagcttaccattctggatgtccgtaagtttaaa
cctctacacaggcgaaaattcaattatgaggtaaatgagattgcttggaacatgccagga
gattttttcttcttgactactggacttggaactgtggaagttctttcatatccatctctt
aaaccacttgacactctcacagcccacacagccgggtgttattgcattgcaattgatcct
aagggaaggtattttgctgttggaagtgcggattctttagtcagcctttgggatatctca
gacatgctttgtttaagaacatttaccaaacttgagtggcctgtcaggacaataagcttc
aactattcgggagagtatattgcttcagccagtgaagatttattcatagatattgctaat
gtccaaaccgggcggacggtgcatcagattccatgtcgtgctgcaatgaatagcgttgag
tggaatcccaaatacaatttactagcatatgcaggtgatgacaagaatcccaagtataat
actgatgaaggtgttttccggatatttggttttgacagcacatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system