KEGG   Camelina sativa (false flax): 104764000
Entry
104764000         CDS       T05044                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X2
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104764000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104764000
   03016 Transfer RNA biogenesis [BR:csat03016]
    104764000
Enzymes [BR:csat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     104764000
Messenger RNA biogenesis [BR:csat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     104764000
Transfer RNA biogenesis [BR:csat03016]
 Prokaryotic type
  tRNA degradation factors
   104764000
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1
Other DBs
NCBI-GeneID: 104764000
NCBI-ProteinID: XP_010485723
Position
19:1246613..1256021
AA seq 922 aa
MLTSPSNALHSSTPHFWPVRRSRLCRSRNFPRLNSGDRSSRGGGGKLCSLSLLSASGAGK
FSVRALVRPDATEEADSVGDGALPFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTDG
ETIVYTTVCLADVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLID
RPIRPTMPKGFYNETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNAKAVAGVRVGL
IGGEFIVNPTVKEMEESQLDLFLAGTDTAILTIEGYSNFLPEEMLLQAVKVGQEAVQATC
IAIEALAKKHGKPKMLDAIRLPPPELYKHVKELAGEELSKALQIKSKISRRKAISSLEEK
VLTILTEKGYVIDEEAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIPLL
FSEVDVKLVFKEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGSTLFTRGE
TQALAVVTLGDKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREVGHGTL
AERALETILPRDEDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGIAM
GMVWDTEEFGGDGLPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEIME
KALIQAKAGRHHILAEMAKCSPPPTLSLSKYAPLIHIMKVHPSKVYFLIGSGGKKVKSII
EESGVEGIDMQDDGTVKIMANDVASLERAKAIIGGLTMVPALGDIYRNCEIKSMAPYGAF
VEIAPGREGLCHISELSAEWLAKPEDAFKVGDRIDVKLIEVNEKGQLRLSVRALLPESET
DKDSQKQQPTSDSTKDKGSPRKYVNTSSKDRASKVASGDDLVLKKKDVRRATGGSSDKTM
KSNSSSNEEERSSLVNGEATIS
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgctgacgagtcccagtaacgcacttcatagtagtactccgcacttctggccagttcgc
cggagcaggctttgccgttctcggaatttccctcgtctcaactccggcgaccgtagcagc
cgcggcggaggaggaaaattgtgctccctctctcttctctccgcaagtggcgccggtaaa
ttcagtgtcagagctctagttagacctgatgctaccgaagaagctgactctgtcggcgat
ggggctttgccttttcctaaccacgtttctgtcaaaatccccttcggcaatagagagatt
ttagtagagactggtcttatggggaggcaagcaagctcagctgtaacggtgacagatgga
gaaactattgtctacacaaccgtttgtctagctgatgttcccagtgagccatcagatttt
cttcccctttatgttcactatcaggagcgtttctcagctgtaggtcgaactagtggtgga
tttttcaagcgagaagggaggaccaaagatcatgaggttctgatttgtaggttgatcgat
agacctatacgccccactatgcccaaaggtttctacaatgaaactcagatattatcctgg
gttttgagctacgatggattacacgcacctgatgctttagctgttacatctgctggaatt
gctgtagctctttcagaagtaccaaatgcgaaagcggttgcaggagttcgggttggtctt
attgggggtgaattcatcgtcaatccaaccgtgaaggagatggaagaatcacaactagat
ttgtttctagctggaacagatactgcaattttaacaatagagggatacagtaattttctt
cctgaggagatgctgctccaagctgttaaagttggacaggaagctgtacaggctacatgc
attgctattgaagctttagcaaagaaacatggaaagcccaaaatgcttgacgctattaga
ttaccacctcctgagctatacaagcatgtgaaagaacttgctggtgaggaattgtctaaa
gcgctacaaattaagagcaaaatatcgagaaggaaagccatatcgtccctggaagaaaag
gtcttaacaatactgacagagaagggatatgttattgatgaggaagcatttggaactata
gaagcacaaccggatctgttggaggatgaagacgaggatgaggaagttgttcctgaaggt
gaggtggaccaaggtgacgttcacattagacccatcccccgtaaacctattcctttgcta
ttttctgaagtagatgtcaagctggtcttcaaagaagtatcgtcgaagctcctacgaagg
cgaattgttgagggaggtaaaagaagtgatggtcggactctggatgagattcgtcctatt
aattcaagatgtggactgcttccaagggcacacggaagtactctgttcacacgtggtgaa
acacaggcactggcagttgttactcttggtgataaacaaatggcgcagagaattgacaac
cttgagggttctgatgaatacaagaggttctatcttcagtacacttttcctccatcgtct
gttggtgaagttggacgaattggagctcccagtagaagggaagtaggtcatgggacacta
gcagagagagcattggagaccattttacctagagatgaggattttccttacacaatacgt
gttgaaagtacagtaattgaaagcaatggttcttcaagcatggcatctgtttgcggcggt
tgcttggctttgcaagatgccggagttccagtcaaatgttctgttgctggcatagcaatg
ggaatggtttgggatactgaagaatttggtggtgatggacttccccttatcctttctgac
atcactggagctgaagatgcatccggtgatatggactttaaggttgctgggaatgaagat
ggcgttaccgcctttcagatggacattaaggtaggaggaatcactttagagattatggaa
aaggctctgatacaggcaaaagctgggcgtcaccatattcttgctgaaatggcaaagtgc
tcaccgcctcctacgttaagcctctcaaaatacgctccattgatacatattatgaaggtt
cacccaagcaaagtatactttcttattggttctggtggtaagaaagtgaagagcatcatt
gaagaatctggagtagagggcattgatatgcaagatgatggaactgtcaaaattatggca
aacgatgtggcgagtctggaaagggcaaaagcaattattggtggattgacaatggttccc
gctcttggtgatatctacagaaattgtgaaatcaaatcaatggctccttatggtgccttt
gtagagattgcgcctgggcgtgaaggactttgccatatcagtgagctgagtgctgaatgg
cttgcaaaaccagaggatgcctttaaagtgggagaccgcattgacgtcaaactaatagag
gtgaatgaaaagggtcagcttcggcttagtgtacgtgctttacttcccgagtcagagaca
gacaaagacagtcagaaacaacagccgacgagtgattctacgaaagacaagggttctccg
aggaaatatgtaaatacttcgtcgaaggatcgtgcatcaaaggttgcatctggggatgac
cttgtcctgaagaagaaagatgtcaggagagcaactggtggtagtagtgacaagacaatg
aaaagcaatagcagtagcaacgaagaagagagaagcagtttagtcaacggggaagctaca
atcagctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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