KEGG T05044: 104766622

Camelina sativa (false flax): 104766622

Entry

104766622         CDS       T05044

Name

(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1

K11367

chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]

Organism

csat Camelina sativa (false flax)

Brite

KEGG Orthology (KO) [BR:csat00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104766622
   03036 Chromosome and associated proteins [BR:csat03036]
    104766622
Transcription machinery [BR:csat03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     104766622
Chromosome and associated proteins [BR:csat03036]
Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     104766622
    SLIK complex
     104766622

SSDB

Motif

Pfam:

SNF2-rel_dom Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD SWI2_SNF2

Other DBs

NCBI-GeneID:

104766622

NCBI-ProteinID:

XP_010488838

Position

19:complement(18104560..18119274)

AA seq 1722 aa
MAFFRNYSNDTVSHNVVDENEEPQNAATFQTSPLNENVDGTFSERGFDMNMDVRYQSDPE
PGCSIRQQSQTAIGDVAGPVDSHYQPSARRMGVTGRWGSTFWKDCQPMGQREGSDPAKDS
QSGFKEAYHSEDNLSNERSEKLDSENENEEDNEMNKHQSGQADVPADEMLSDEYYEQDED
NQSDHVHYKGYSNPTNSRSLPKTGSAIHSNSRASRAIHRNIHYSNSNHEHNGDADIDYEE
EEDEDDPEDADFEPYDAVDDGGARKKHGQGWDVSDEDPESDDDIDLSDYEDDYGTKTPKV
RQHSKGFRKSSSVLERKSSHASIRQKRKTSYQDDVSEEDSDNDNDEGFRSLARRGTTLRQ
NNGRSTNNIGQSSEVRSSTRSVRKVSYVESEDSEDIDDGRNRKNQKDDIEEEDPDVIEKV
LWHQPKGMGEDAPTNNKSTVPVLVSQLFDTESDWNEMEFLIKWKGQSHLHCQWKTLSDLQ
NLSGYKKVLNYTKKVTEEIRYRTALSREEIEVNDVSKEMDLDIIKQNSQVERIIADRISK
DGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAIDEYKAREVSIAVQGKMVEQQRTK
GKASLRKLDEQPEWLSGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLG
FLQNTQQIPGPYLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKK
VGRPIKFNALLTTYEVVLKDKAFLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKL
LITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILR
RVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFRDLNKGVRGNQVSLLNIVVELK
KCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMV
RMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLA
TADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDH
LVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKEEKNDEESKKRLLSMDIDE
ILERAEQVEEKDTGETEHELLGAFKVANFCNAEDDGSFWSRWIKPESVVTAEEALAPRAA
RSTKSYVDPSHPDRTSKRKKKGSEPPEHTERSQKRRKTEYFVPSTPILEGTSAQVRGWSY
GNLPKRDAQRFYRTVMKFGNHNQIACIAEEVGGVVEAAPEEAQVELFDALIDGCKESVET
GNFEPKGPVLDFFGVPVKANELLKRVQGLQLLSKRISRYDDPISQFRVLSYLKPSNWSKG
CGWNQIDDARLLLGILYHGFGNWEKIRLDESLGLAKKIAPVELQHHETFLPRAPNLKERA
TALLEMELAAAGGKNTNAKASRKNSKKVKDNLINQFKAPARDRRGKSGPANVSTKDGPQR
TQKAEPLVKEEGEMSDDEEVYEQFKEQKWMEWCEDVLADEIKTLGRLQRLQSTSADLPKE
KVLFKIRRYLEILGRRIDEIVVEHEEDLYKQDRMTMRLWNYVSTFSNLSGDRLNQIYSKL
KQEKEEEEGVGPSHLNGSSAGFGSRNFQRQQKYKTAGNSQGSQQVYKGIDTAKFEAWKRR
RRTENDVQSERPPITNSNSLGILGPGPLDRSHRARQTGFPPR

NT seq 5169 nt +upstreamnt +downstreamnt
atggccttctttagaaactactcaaacgatactgtgtcacataatgttgtggatgaaaat
gaggagccgcaaaatgctgccacttttcagacttcacctttgaatgaaaatgtggatggt
acctttagtgaaagaggctttgacatgaacatggatgtacggtatcaaagtgacccagaa
ccaggatgtagtattaggcagcaaagtcagacagcaattggtgatgtagctggtcctgtg
gattcccattatcaaccttcggctaggagaatgggtgtcacagggaggtggggttccacg
ttttggaaagactgtcagccaatgggacagagagagggctctgatcctgccaaagattca
caatccggtttcaaagaagcataccattctgaagataatctctcaaatgaacgtagtgaa
aagttagattctgaaaatgaaaatgaggaggataatgaaatgaacaagcatcaaagtggt
caagctgatgtcccagcagatgaaatgttgtctgatgaatattatgaacaggatgaagat
aatcaaagtgatcatgtgcactacaaaggatatagtaatcccacaaattctagatcactg
ccgaagacaggatctgctatccatagcaactcgagggcctcaagagcaattcacagaaac
attcactatagtaatagtaatcatgaacacaatggtgatgctgatatagactatgaagag
gaggaagatgaggatgaccctgaagatgctgactttgagccctatgatgctgttgatgat
ggtggtgcaaggaaaaagcatggccaaggttgggacgtttctgatgaagatcctgagagt
gatgatgatatcgatctttccgactacgaggatgactatggtacaaaaacgcccaaggtt
aggcaacatagtaaaggtttccggaaatctagctctgtacttgaacgaaaatcatcccat
gcttctattcgacaaaagaggaaaacgtcatatcaagatgatgtctcagaggaggactct
gataatgacaacgatgagggttttagaagcctggccagaagaggcacaactctccgacaa
aacaatggaaggtcaaccaataacataggacagagtagtgaagttcgcagctccacccga
tcagttcgtaaagtctcttatgtggagagtgaagacagtgaagatatagatgatgggaga
aatcgtaaaaaccaaaaggatgacattgaagaggaggatcctgatgttattgaaaaagta
ctctggcatcagccgaagggtatgggtgaagatgctcccacaaataacaaatcaacagtt
cctgttttagttagccaactgtttgatactgagtcagattggaatgaaatggaattcctt
ataaaatggaaaggccaatcacacttgcattgtcagtggaaaacgttgagcgatctccaa
aatcttagtgggtataagaaggttcttaactatacgaagaaagtgacggaggagattagg
tataggacagcactctcacgagaggagattgaggtcaatgacgtgagcaaagaaatggat
ctggacatcattaagcagaatagtcaggtagaaagaataattgcagatcgaatcagcaaa
gatggtttaggggatgttgtgccagagtatctagttaagtggcaagggctatcttatgct
gaagcaacttgggagaaggatgtcgatatagcatttgcacaagttgctattgatgagtac
aaggctcgtgaagtttcaattgcagtgcaagggaaaatggtagaacagcagcgtacaaaa
ggaaaagcaagtttgaggaagcttgacgagcagcctgagtggctaagtggaggtactcta
cgggactatcagctggagggtttgaattttcttgtcaacagctggcttaatgatactaat
gtcattttggctgatgaaatgggtcttggtaaaacagttcagtcggtttcaatgcttggg
tttttgcagaatacccaacaaatcccaggtccatatcttgttgttgtgcctttgtcaact
ctagctaactgggctaaagaatttagaaagtggcttcctggcatgaatataatagtatat
gttggcacccgagctagtcgagaggtatgtcagcaatacgaattttacaatgaaaagaaa
gtaggccgtcccataaagttcaatgcactgttgactacttacgaagtagttctgaaggat
aaagctttcctctccaagattaagtggatttacttaatggtggatgaagcacatcgactg
aaaaatagtgaggcacagctctacacagctcttttggaatttagtacaaagaacaaattg
ctaattactggtactccactacagaatagtgtcgaagagctttgggctctgctccacttt
cttgatcctggcaagtttaagaataaggatgagtttgttgaaaactacaagaaccttagc
tcatttaatgaatctgaactcgccaatcttcatttagaattgagaccccatattctacga
cgagtgattaaagatgttgagaagtcgttgcctccaaaaatcgaacgtatactaagagtt
gagatgtcccctcttcagaaacagtactacaagtggatactggagcgcaacttccgtgat
ttaaataaaggggtgcgcggtaatcaggtttcacttttaaacatcgtggtggagttgaag
aaatgctgcaatcatcctttcttatttgagagtgcagaccatggatatgggggtgatata
aacgataactctaagctggataaaattattttaagtagcggaaagctagttatcctagac
aagctactggttagactgcgtgagactaagcatcgtgtgctcatcttctctcagatggta
agaatgttagatatcctggcggaatacctgtctcttagaggtttccagttccagagacta
gatggtagtactaaggcagaactgcgtcagcaggcaatggatcattttaacgcacctgct
agtgacgacttttgctttcttctttcgacccgagctggtggactgggtatcaatcttgct
actgctgatacagtcgttatatttgactctgattggaatccacagaatgatctgcaggcc
atgagtcgagcgcacagaattgggcaacaagaggtcgtgaacatttatagatttgtcact
agcaaaagtgttgaagaagagatcctggagcgcgcgaaaagaaaaatggtacttgatcat
ttggttattcaaaaattgaatgctgagggtaggctggagaagcgagaaactaaaaaggga
agtaattttgacaagaacgagctttctgcaatattgagatttggagcggaagaacttttt
aaagaggagaaaaatgatgaagaaagtaaaaagcggttgttgagtatggatattgatgaa
atcctagagagggcagagcaagttgaggaaaaggatactggtgaaacagaacacgagctg
ttgggtgcttttaaggttgccaacttttgcaacgctgaagatgatgggtccttctggagt
cgctggataaaacctgaatctgtggttacagccgaagaagctcttgcaccacgggctgct
aggagtacaaagagttatgtggatcctagccatcctgacaggactagcaaaaggaaaaag
aaaggatctgagcctccggagcatacagagagaagtcagaagcgcagaaaaactgaatat
tttgttccttcaaccccaatattagaggggacttcagctcaagtgagaggctggtcttat
ggaaatcttcctaagagagatgcgcagcgattttatcgaactgtcatgaagtttgggaac
cataaccaaattgcatgtattgcagaagaggtgggtggtgttgttgaagcagccccggag
gaagcacaagttgagctgtttgatgcgttaattgatggttgtaaggaatctgttgaaaca
ggaaattttgaaccaaagggtcctgtgttggatttctttggtgtgccagtaaaagcgaac
gaactattaaaacgtgtgcaagggctgcaactcctatcgaagcgcattagtcgatatgat
gatccaatttcacaattccgggtgttgtcataccttaaaccttcaaattggtccaagggt
tgcggttggaatcagattgatgatgcgagattgcttctgggaatactttatcatggtttt
gggaactgggaaaagattagattagatgagagccttggacttgcaaagaagattgctcct
gttgaacttcaacaccatgagacttttctacctcgtgctccaaacttaaaggagcgtgcc
actgcacttctggaaatggaactggctgcagctggagggaaaaatacaaatgcaaaagca
tcccgtaaaaattccaaaaaggttaaggataatcttatcaatcaatttaaagcgcctgcc
agagaccgaagaggaaaatcgggtcctgccaatgtatcaaccaaagatggacctcagaga
acccaaaaagctgagccgctggtaaaggaagaaggagaaatgtctgatgatgaggaagtt
tacgagcagttcaaggagcagaaatggatggaatggtgtgaagatgtcttggcggatgaa
atcaaaactcttggacgtctacaaagattgcaaagcacgagtgcagatctgccaaaggag
aaggtgcttttcaaaatccggagatatttggaaatcctagggcgaagaatagatgaaatt
gtcgtagaacacgaggaagatttatacaagcaagatagaatgacaatgagattgtggaac
tatgtttcaactttctcaaatttgtcgggggatcgactcaatcagatatactccaaactg
aagcaggagaaagaagaagaggaaggggtcgggccatcgcacctaaatggctcatctgct
ggctttggttctaggaacttccagaggcaacaaaaatacaaaacagcagggaattcccaa
ggatcgcagcaggtatacaagggcattgacacagcaaagtttgaagcctggaagcggcga
agaagaacagaaaacgatgtgcagtctgagcgaccaccgataacaaactctaactcactg
ggaatactcggccctggaccattggatagaagccatcgggcacgtcaaactggatttccc
ccgagataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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