KEGG   Camelina sativa (false flax): 104793314
Entry
104793314         CDS       T05044                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104793314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104793314
Spliceosome [BR:csat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    104793314
 Complex C
   U5 SnRNP specific factors
    104793314
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Ge1_WD40 Nbas_N Nup160 RMC1_N
Other DBs
NCBI-GeneID: 104793314
NCBI-ProteinID: XP_010517955
Position
6:complement(24202811..24204822)
AA seq 343 aa
MEIMPRENENALSGPRPMEWSTVPHNAPQGPGPIGKNRTSSLEAPIMLLSGHPSAVYTMK
FNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTV
RAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK
YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHEDTITGMSLSPDGSYLLTN
GMDNKLCVWDMRPYAPQNRCVKIFDGHQHNFEKNLLKCSWSPDGTKVTAGSADRMVHIWD
TTSRRILYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggagatcatgccaagagagaatgaaaacgctttgtcaggtcctaggcctatggaatgg
tctactgtcccacacaatgctcctcaaggacctggtcccattggcaagaaccggacatcg
agcttggaggcacctatcatgttgctaagtgggcatccaagtgctgtctataccatgaag
ttcaatccagctggaactctgattgcatctggatcccatgatagggaaatcttcctctgg
agagttcacggggactgcaaaaacttcatggttttgaaaggtcacaagaacgccatcctt
gatcttcattggaccagtgatggctctcagattgtatcagccagtccggataaaactgtc
agagcatgggatgttgaaactgggaagcaaatcaagaagatggctgaacattcttcgttt
gtgaattcttgctgtcccacacgtagaggaccaccgcttatcatcagtggatctgatgat
ggaactgccaagctttgggacatgcgtcaaagaggagccatacaaacattccctgacaaa
taccaaatcacagccgtcagtttctctgatgcagctgataagattttcactggtggtgta
gacaatgatgttaaagtttgggacttgcgaaaaggtgaagccacaatgacacttgagggc
catgaagatacaatcacaggtatgagcttaagtccagacggttcctatcttctcaccaat
ggaatggacaacaagctctgcgtgtgggacatgcgtccttatgctccacagaaccgatgt
gtcaagatctttgatgggcatcaacacaactttgagaagaacctactgaaatgttcatgg
tcacctgatggtaccaaagtcactgctggtagtgcagaccgtatggttcacatatgggac
acaacaagtcggcgtattctgtataagctccccggccatactggctctgtcaatgagtgt
gttttccacccaaccgagcctatcattggatcttgcagtagtgataaaaacatctactta
ggagagatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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