KEGG   Camelina sativa (false flax): 109124813
Entry
109124813         CDS       T05044                                 
Name
(RefSeq) squalene synthase 1-like isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
csat  Camelina sativa (false flax)
Pathway
csat00100  Steroid biosynthesis
csat00909  Sesquiterpenoid and triterpenoid biosynthesis
csat01100  Metabolic pathways
csat01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:csat00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    109124813
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    109124813
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:csat01006]
    109124813
Enzymes [BR:csat01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     109124813
Prenyltransferases [BR:csat01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   109124813
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 109124813
NCBI-ProteinID: XP_010447048
Position
12:complement(2830650..2835267)
AA seq 410 aa
MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNT
DLRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYNTDWHYSCGTKEYKVLMD
QFHHVAAAFLELEKGYQEAIEEITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL
SKLFLAGGSEVLTPDWEAISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREVWGKYAD
KLEDLKYEENSTKSVQCLNELVTNALMHIEDCLKYMAALRDPSIFRFCAIPQIMAIGTLA
LCYNNVQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASMTLN
RLEAVQKLCIDTGVLNNRKSYVDDKGQPYNVFIIMVVILLAIVFAYLRAN
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggggagcttagggacgatgctgagatatccggatgatatatatccgctactgaagatg
aaacgagcgattgagaaagcggagaagcagatcccgcctgagccacactggggattctgc
tattcaatgctccacaaggtttctcgaagcttctctctcgttatccagcagctcaacacc
gaccttcgtaacgctgtgtgtgtgttctacttggttctccgagctcttgatactgttgag
gatgatacaagcataccaactgatgaaaaggttcccatcctgatagctttccaccggcac
atttacaatactgactggcactattcatgtggtacgaaggagtacaaggttctaatggac
caatttcatcacgttgctgcagcttttttggaacttgaaaaagggtatcaagaggctatc
gaggaaattactaaaagaatgggtgcaggaatggccaagtttatctgccaagaggtagaa
actgttgatgactatgatgaatactgccactatgttgctgggcttgtgggtttaggtctg
tcgaaactcttcctcgctgggggatcagaggttttgacaccagattgggaggcgatttct
aattcaatgggtttatttctacagaaaacaaacattatcagagattatcttgaggacatt
aatgagataccaaaatcccgcatgttttggcctcgcgaagtttggggcaaatatgctgac
aagcttgaggatttaaaatacgaggaaaactcaaccaaatccgtgcagtgcttgaatgaa
ctggttaccaatgcgttgatgcatattgaagattgcctgaaatacatggctgcgttgcgt
gatccttcaatatttcggttctgtgccatccctcagatcatggcgattggaacacttgca
ttatgctataacaatgtacaagtatttagaggcgttgtgaaactgaggcgaggtctaact
gctaaagtcattgatcgcacaaagacaatggctgatgtctatggtgcattctatgatttt
tcttgcatgctgaaaacaaaggttgacaagaacgatccaaatgccagtatgacactaaac
agacttgaagccgttcagaaactctgcatagacactggagtccttaataacagaaaatca
tatgttgatgacaaaggacaaccatacaatgtctttattataatggttgtcattctactg
gcaatagtctttgcatatctgagagcaaactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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