KEGG T00506: Csac

Caldicellulosiruptor saccharolyticus: Csac_0362

Entry

Csac_0362 CDS T00506

Definition

glycoside hydrolase family protein

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

csc Caldicellulosiruptor saccharolyticus

Pathway

csc00052	Galactose metabolism
csc00511	Other glycan degradation
csc00600	Sphingolipid metabolism
csc01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:csc00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:csc00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:csc00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2 Bac_rhamnosid_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(390530..393610)

AA seq 1026 aa
MLDKNYYQNPKIQHINREEPRSSFIPFDNHQKALENEWELSNLFRLLNGKWYFKLFEKPC
MVTEDIILADTKSCNFDQIIVPSNFQMFGYDIPIYTNTRYPIPVDPPFVPDINPTGVYKR
EFYISQEDLDKEIFVVFEGVDSAFYVYINGKFAGFSKVSHMMHEFDITRFVQEGRNTITA
IVLKYSDGTYLEDQDKWRMSGIFRDVYLLLRPKVFVRDVYLKSTLSDDLKEGHLTAEIEI
KNRSNDQKEFSVEVQVFFDKTLIKSSNKSLRLSASGKQEITFEFQIENPRLWSAELPNLY
TLIVALKDSSGGMLEIIPQNFGFRKIEIKDGVFYLNNVPIKLKGVNRHDMHPRVGFAVTR
KMMQEDITLMKQHNINCVRTSHYPNHPYFLELCDRFGIYVIDEADLETHGFGAVGDWGLL
AKDPVWEDAFVERAKMMVKRDKNHPSIIMWSLGNESGYGPNHDKMAQWIRSYDNSRPIHY
ESARDAEVVDIVSVMYPSVEKFEEEGKKQEKRPFFMCEYAHAMGNGPGNLKEYWDVIYKY
PRLLGGCVWEWADHGILTKIPDGKEYYAYGGDFGDEPNDGNFCIDGLLFPDRTPSPGMIE
LKKVYEPVVIELLDKESGIFKITNRYDFISLNHIEVEWKLLSGGRVVKEGFVDVSDVLPR
SSKEVKIDEVKEVLESCKEELFITFTAKLKNSLPWAKRGFVITKSQIALIEDTPQDAVQK
IEKVNVIFSKQNRFEVVNSPDKVEVFAGSTLVEFCRWSGDLISLKHNGLDFIKSSPRFNL
WRAPTDNDVHIKNEWIKAGFDKLQRRIVNVSFEEHSEYFKVQTTSVYGAYSVKPVFEVTT
SYKVFKSGIVETNVYAQALRQLPPLPKIGLQFMMPKEFEYVKYYGRGPHENYPDIKQSAT
VEIYDMAIKDMYVPYIMPQEYGNRCDVRWAFVYNIYGIGLCIKGIPTFNFSAREYTDDVL
TRAKHTYELTKADGIVVNVDYKIGGIGSQSCGPGPLEKYLIKDEKFEFCFYMIPVDSNSL
DVEKLW

NT seq 3081 nt +upstreamnt +downstreamnt
atgcttgacaaaaattactatcaaaatccaaaaattcagcatataaacagagaagagcca
agaagttcttttataccttttgacaatcatcaaaaagctttagaaaatgaatgggagctt
tcaaatctttttaggctactgaatggaaagtggtattttaaactttttgaaaagccatgc
atggtaacagaggatataatcttggcagatacaaaaagttgtaattttgaccagattatt
gtcccaagtaactttcagatgtttggctatgacataccaatttatacaaataccagatat
cccatccctgttgacccaccgtttgtaccagatataaacccaacaggtgtctataaaaga
gaattttatatttctcaagaagacttagacaaagaaatatttgttgtatttgaaggggta
gactcagcattttatgtatatattaacggtaagtttgctggtttttcaaaggtctctcac
atgatgcatgagtttgacataacaagatttgtccaagaaggaagaaatactatcacagct
attgttttaaaatattcagatggaacttacttagaagaccaagacaaatggcgaatgagt
ggaatattcagagatgtgtatcttcttctgcgaccaaaggtgtttgtaagagatgtgtat
ttaaaatcaactttgagtgatgacctcaaagaaggacacttgactgctgagattgaaatt
aaaaacagaagcaatgaccaaaaagaattcagtgtagaggtacaagttttctttgataaa
actttaatcaaaagctcaaacaaatcgttaagactttctgcctctggcaagcaagagatc
acttttgaatttcaaattgaaaatccaagactatggagtgcagagctgcccaacctttat
acattaattgtagcattgaaagatagctccggcggcatgttggaaattattcctcaaaac
tttggatttaggaaaatcgaaataaaagatggcgtgttttacctaaataatgttccaatt
aaactcaaaggtgtcaacaggcatgacatgcacccgagagttggatttgcagtgacaaga
aagatgatgcaagaagacataaccttgatgaaacagcacaatataaactgtgtaagaacc
tcacactatcccaaccatccttattttttagagctatgcgacagatttggtatttatgtg
attgatgaagctgatttggaaacacatggatttggagcagttggtgactggggactttta
gcaaaagacccagtgtgggaagatgcgtttgttgaaagggcaaagatgatggtaaagagg
gacaaaaaccatccatcaatcatcatgtggtcgcttggaaacgagtctggctatggtcca
aatcacgataaaatggcacagtggataaggtcatatgataatagccgtcctattcattat
gaaagtgcccgtgatgctgaagttgtggatattgtaagtgtaatgtacccttcagtagaa
aagtttgaagaagagggcaagaagcaagaaaaaaggccatttttcatgtgtgagtatgca
catgcaatgggaaatggtcctggaaacctcaaagagtactgggacgtgatatacaaatac
ccaaggcttttaggtggatgtgtgtgggagtgggcagaccacggaattttgacaaagata
cctgatgggaaagagtactatgcctacggcggggattttggagatgagccaaacgacggt
aacttctgtatagacggacttcttttccctgacagaactccatctcccgggatgattgag
ctcaagaaagtttacgaaccagttgttattgagcttttagataaagaaagcggaattttc
aagatcacaaacaggtatgattttatatctttgaatcacattgaagttgaatggaaactt
ctgtcaggtggcagggttgtaaaagagggctttgttgatgtgagcgatgttcttccccgc
tcttcaaaagaggtcaaaatcgatgaagtcaaagaagttttagaaagctgcaaggaagag
ctttttattaccttcacagcaaagcttaaaaattcactgccttgggcaaaaagaggtttt
gttataacaaaatctcagattgcacttatagaagacactcctcaagatgccgtacaaaaa
attgagaaggtaaatgttattttctcaaagcaaaacaggtttgaagtggtaaattctcct
gacaaagttgaggtttttgctggcagcactttagtagagttttgcagatggtcaggtgat
ttgataagcctgaagcacaacggtcttgattttataaaatcctcgccaaggttcaatctt
tggagggctccaacagacaacgatgtgcacatcaaaaatgaatggataaaagctggattt
gacaagcttcaaagaagaattgtaaatgtcagctttgaagagcacagcgagtacttcaaa
gtacaaacaacttcggtatatggcgcatattcagtaaaacctgtatttgaagtaaccaca
agctacaaggttttcaaatcgggaattgtagagacaaatgtgtatgcgcaagctctcaga
cagcttccgccacttccaaagataggactgcaatttatgatgccaaaagaatttgagtat
gtcaaatattacggaagaggccctcatgaaaactatcccgatataaaacagagcgcaact
gtagaaatatatgacatggctataaaagacatgtacgttccatatataatgccccaggaa
tatggaaacaggtgcgacgttagatgggcgtttgtatacaatatatacggaataggactt
tgtattaaaggcatccctacatttaacttcagtgcaagagaatatactgatgatgtactc
acaagagcaaaacacacatatgagctgacaaaagcagatggaattgttgtgaatgtagat
tacaagattggtggtatcgggagccagagctgtggccccggcccgcttgagaagtactta
atcaaagatgagaaatttgaattttgcttttatatgatacctgttgatagcaatagtttg
gatgttgaaaagctgtggtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CSC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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