KEGG   Cynoglossus semilaevis (tongue sole): 103379361
Entry
103379361         CDS       T04866                                 
Symbol
ddx28
Name
(RefSeq) probable ATP-dependent RNA helicase DDX28
  KO
K20096  ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csem03009]
    103379361 (ddx28)
Ribosome biogenesis [BR:csem03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   103379361 (ddx28)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-GeneID: 103379361
NCBI-ProteinID: XP_008309109
UniProt: A0A3P8VXT7
Position
5:complement(17828366..17830408)
AA seq 561 aa
MQFVKVGRFPSAVVRAVSSGSTCCPRLVRLCSSPWTVDSSVCRTRLSSTAASSTEDTVVI
RVPRYLQKRIENIKHTRGKNKIPTIRAGKLLIQGRNPTLNQSTGYVLGKFEQPNLCSKGW
KHNKSFGDYFTVNNTSSVAPCVTESYKEEEAEKKTTTTFKNLHICTELVELLETDNIKYP
TTVQRQVIPKIMKGHNVLCAAETGSGKTLSYLLPIINRLRTDEKSSRIRALVLVPSRELA
DQVVAVARRLCAPFGLLARTVGGGRGIGHIKGVFKSDHPHILVATPGALVKAIRKNFTHL
SELRFFVVDEADTMFDPSFSDLLQTILSCTYISRGPQETQGLSQKAQLLVVGATFPGGVG
EVLSHVTDLGSMKVIKSKMLHLLMPHVKQTFLKVKGADKVLELNQALKSHQQEKGADAVL
VFCNKSATVNWLGYALDELGVHHMRLQGEMPASVRTGIFNSFQSGVVDVLICTDIASRGV
DTSRVHLVVNYDFPESLTDYIHRAGRVGRAGGAENGKVLSFVTHPWDVNLVQKIETAARR
RSILPGLETEIHEPKPEVQEE
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgcagtttgtaaaagtcggtcgtttcccctcggctgtggtcagagcagtctcctctggc
agcacttgttgtccccgcctcgttcgactatgttcgtctccctggaccgttgactcctct
gtctgccggactcgtttaagttccaccgcagcctcgtccacggaggacaccgtggttatc
cgtgttcctcggtatctgcaaaagcgcatcgagaacatcaagcatacacgaggcaaaaat
aagatccccaccatccgagccgggaaactgctgatccagggcaggaatcctactttgaac
cagtccacaggatacgttctggggaagtttgaacaaccgaatctttgttccaaaggatgg
aaacacaacaaatcctttggtgactacttcactgtaaacaacaccagctctgtggcaccg
tgtgtgactgaaagttacaaagaagaagaggctgagaaaaaaacaacgaccacctttaaa
aaccttcacatctgcacggagttggtcgagcttttggagactgataatattaaatatccc
accactgtgcagcggcaggtcatcccaaaaattatgaaaggtcacaatgtgctctgtgct
gcagaaacaggaagtggaaagaccttgagttatctactgccgatcattaacagactgagg
acggacgagaaatccagcagaattcgagctttggttctggttccttccagagagttggct
gatcaagtggtcgctgtggcccgccgtctctgtgctccgtttggattgctggctaggact
gtaggtggtggccgaggcattggacatatcaaaggggtcttcaagagtgaccatccacat
attttggtggcgacacctggtgctcttgtgaaggcaattaggaagaattttacacacttg
agtgagttgaggttctttgttgtagatgaggctgataccatgtttgacccaagcttttct
gacttgctccaaactatcctgagctgcacttacatttctcgcggtcctcaggaaacacaa
ggactctcccagaaagctcagttgctggtggtgggcgccaccttccctggtggtgttggt
gaagtgctcagtcatgtgacagatcttggcagcatgaaagtcattaaaagtaagatgctg
cacctcctcatgccacatgtcaaacagaccttcctgaaggtgaaaggtgctgacaaagtc
ctggagctgaaccaagctctaaagtcgcatcaacaagaaaaaggagcagatgctgttctg
gtgttctgcaacaaatctgccactgttaactggttggggtatgctcttgacgaattgggg
gttcaccacatgcgtctccaaggggagatgcctgcgtctgtgcgtacaggaatcttcaac
tccttccaatcgggcgtagtggatgtactgatttgtacagatattgcctcacgtggcgtg
gacacgtcccgggtgcatttggttgttaactatgactttccagaatcactcacggactat
attcacagagcagggagagttggcagagctggaggtgcagagaatggcaaagtgctcagt
tttgtaacccacccttgggatgtgaacctggtacagaagatagaaactgcagcacgaagg
aggtctattctgccagggttagagactgagatccatgaaccaaagcctgaggtacaggag
gaataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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