KEGG   Cynoglossus semilaevis (tongue sole): 103385425
Entry
103385425         CDS       T04866                                 
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103385425 (col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103385425 (col9a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103385425 (col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:csem00535]
    103385425 (col9a3)
Proteoglycans [BR:csem00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   103385425 (col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 103385425
NCBI-ProteinID: XP_008317531
UniProt: A0A3P8X442
Position
10:18742796..18756078
AA seq 678 aa
MAAFSALWMLLLFQLLASSLSQRPGPRGAPGPPGPGGPPGRDGTDGKPGPAGLPGKSGPK
GKSGIPGVAGKPGLPGLPGVDGLTGVDGPAGKDGAPGEAGEPGPSGPPGPPGRGRPGAAG
LPGTNGLPGGLGPQGPVGAEGLPGLPGPAGPDGPPGLPGTLHDLNGDLLCPAICPPGPSG
PPGMPGFKGHTGHKGNKGEPGKDGEKGDAGPPGPPGIPGTVGLQGPRGLRGLQGPMGGVG
DRGLPGFRGKPGVAGIIGKTGDAGEKGPQGFRGPKGEVGKIGPKGTPGGAGPKGEPGIPG
RDGKDGTPGLDGEKGDAGRHGVVGEKGPNGLPGLQGKAGVKGSKGEVGDPGKSGETGPSG
EPGIPGDIGVPGERGVAGPRGVAGGIGPAGNPGPQGVKGFQGVKGALGDPGLPGPTGVRG
EFGERGPVGASGAKGDMGVAGSDGLPGENGEPGPFGPVGQKGGAGKPGELGPKGVTGPQG
ELGARGAPGKPGLMGLQGEQGMPGIAGKTGVPGKLTSEQHIRELCGSMIDDQIAQLAANL
RRPLAPGLVGRPGPAGSPGQPGVAGSIGHPGARGPPGYRGLPGELGDPGPRGDVGEAGDK
GPIGKAIDGPTGDQGSQGLPGVPGIVKDGRDGSPGDPGESGESGRVGRTGHQGPPGICDT
SACQGAAPVGKSSNPKNY
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggcgttctctgctctttggatgctcctgctgttccaactgttggcgtcatcactg
tctcagagaccaggtcccagaggagctccaggacctccaggaccaggaggaccaccagga
cgggatggcactgatggcaaacctggaccagccggactcccagggaaatcaggtcccaaa
ggaaagtcaggaattccaggagtagcgggaaaaccaggtctgccaggacttccaggggtc
gacggtttgactggtgtcgatggtcctgctggtaaagatggagctcctggagaagcgggt
gaacctggaccttctggaccaccaggacctcctggcagggggcgccctggagctgcagga
ttaccagggaccaacggtttaccaggaggactgggtcctcagggtccggtgggagctgag
ggtcttccaggtcttccaggacctgctggccctgacggacccccgggtcttcctggaact
cttcatgatctcaacggtgaccttctgtgtcctgcaatctgcccacccggtccatctggt
ccacctgggatgccaggatttaagggtcacacaggtcacaaaggaaacaaaggagaacca
ggaaaagatggagaaaagggtgacgctggtccacctggtcctccaggtattcctggtact
gtgggtctgcagggcccacgtggactgcgaggtttgcagggacccatggggggagtaggg
gacagaggtctgcctggtttcaggggaaaacccggagtcgctgggatcattgggaagaca
ggcgacgctggtgaaaaaggacctcagggatttagaggacccaaaggagaagtgggtaaa
attggaccaaaaggaacaccaggaggagcaggacctaaaggcgaacctggtattccaggc
agagatggtaaagacggtacaccaggactagacggagaaaagggtgatgctggacgtcat
ggtgtggttggagaaaaaggaccaaacggacttcctggtctacaaggaaaggctggagtg
aagggatctaaaggagaagtgggtgatcctgggaagtctggagagacgggaccctctgga
gagccaggtattcctggtgacatcggtgtcccaggagagaggggggtcgctgggcccaga
ggagtggctggaggaatcggaccagcaggaaatcctggacctcagggagtcaagggattt
cagggggtaaaaggagccttgggggatccaggtctcccaggtccaacaggagtccgtgga
gagtttggtgaaaggggtccagtgggggcatcaggagctaaaggagacatgggagtcgca
ggaagtgatggtctaccaggagagaatggagaacctggaccttttggaccagtgggacag
aaaggaggggcaggaaaaccaggggaactgggtccgaagggtgtgactggtccacagggg
gaacttggtgccagaggagctccaggaaaaccaggactaatgggtctccagggagaacag
ggaatgcctggaattgcaggaaagaccggcgtacctggtaaactgaccagtgagcagcac
atcagggagctgtgtgggtcgatgatcgacgatcagatcgcacagttggccgctaacctg
cggagacctctggctcctggactggtcggtcgtccaggtcctgctgggtctccaggacag
ccaggagtcgctggttctattggacatccgggagcccgcggaccaccggggtacagaggt
ctgccaggagaactgggagaccctggtcccagaggtgacgttggtgaggccggggacaag
ggacctattggaaaagccatagatggacctactggagatcaaggatcccaaggtcttcca
ggagtacctggaattgtcaaagacggtcgtgatggttctccaggagatccaggtgagtct
ggagaatcaggcagggtgggcaggaccggacaccaaggacctccaggaatctgtgacacg
tcggcctgtcagggagcagcacctgttggaaagtcctccaaccccaagaactattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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