KEGG   Cynoglossus semilaevis (tongue sole): 103388760
Entry
103388760         CDS       T04866                                 
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103388760 (taf2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:csem01002]
    103388760 (taf2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csem03021]
    103388760 (taf2)
   03036 Chromosome and associated proteins [BR:csem03036]
    103388760 (taf2)
Peptidases and inhibitors [BR:csem01002]
 Metallo peptidases
  Family M1
   103388760 (taf2)
Transcription machinery [BR:csem03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103388760 (taf2)
   Coactivators
    SAGA/TFTC/STAGA complex
     103388760 (taf2)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     103388760 (taf2)
SSDB
Motif
Pfam: HEAT_2 Peptidase_M1 Peptidase_M1_N SR-25 IL2 RNA_polI_A34 CCDC106
Other DBs
NCBI-GeneID: 103388760
NCBI-ProteinID: XP_008322118
UniProt: A0A3P8VRI8
Position
13:16016656..16037151
AA seq 1212 aa
MNRKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGYVELTIFPTVVNLNRIKLNSKQCR
IYRVRVNELEAPFIYNDPTLEVCHHESKQRNLNYFSSAYAAAVSAVDPDAGHGELVIKVP
AELWKKRDDLKVLKVYIEFSLDQPKGGLHFVVPDIEGSMAERGAHVFSFGYQNSSRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLVETIYTHDMRKKTFHYVLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHTMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
AYVQVSAYASMGIFSTNLLHSAMIIDQTPMTRQCLAQALAQQFFGCFISRMTWADEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDKIVDYELKMGGVLLHPTFSGVKEKDNPTPHL
HFSVKHPHTLSWEYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLVSTHAFLKSISNVSGKDIGPVIKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQMEAIAALEK
FPTPASRLALTDILEQEQCFYKVRMMACFCLARIANAMVSTWQGPPAMKSLFTRMFCCKS
CPNIVKTNNFINFQSYFLQKTMPVAMALLRDVQNLCPKDVLNFILDLIKYNDNRKNKFSD
NYYRADLIEALTNSLTPAISINNEVRTVDNLNADVRLILEEITRFLNMEKLLPSFRNIIT
VSCLKAIRQLQKNGHIPSDPSLFKSYAEYGHFVDVRIAALEALVDYTRVERSAVELQWLL
LMVQDDPSHYVRHEILGMLSKNPPFTKASESGLCNEALVDQLWKLMNSGTSHDWRLRCDA
VNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPELGMMSVAIDTPASIGIHGV
GMSYAAVEEEPDPVSLGVCGVGQPLQSLKRKAETPLGSPPEPGQILQQQDDDGRGGRYKI
RFNNMEDEDIDMETVHDSQAFIHQHLNLLERPSTPGKEPLSVEQAILSMPATPVPSFSKE
TTSSSSKHAGEHGHHHHHHHHEHKKKKKKHKHKHKHKHKHESKDKERERDNSHAYSNSPA
SGRSLHSPSLSD
NT seq 3639 nt   +upstreamnt  +downstreamnt
atgaacaggaagaaggataaaggatttgagagtcctcggccttttaaattgacccaccag
gtggtgtgcatcaataacataaacttccagaggaagtccgttattggctacgttgagctg
accattttccccacagtggtgaacctgaacaggatcaagctcaacagtaaacagtgtcgc
atttatagggtccgcgtcaatgaactagaagctccattcatttacaatgaccccacattg
gaagtgtgtcaccatgagtctaagcagaggaatcttaattatttctccagtgcctatgca
gcagcagtgagtgctgtagatccagacgctggtcatggggaactggttattaaagttcct
gctgaactctggaaaaaaagagatgacttgaaagttttgaaggtgtacatagaattttct
ctggaccagccaaaaggaggtctccactttgttgttcctgatattgagggcagcatggca
gaaagaggagctcatgtgttttcctttgggtaccagaactcctccaggttctggttcccg
tgtgtggattcctactccgagctctgtacttggaagctagagttcactgttgatgcttcc
atggtggcagtgtcctgtggtgatttagtggagaccatttacactcatgatatgagaaag
aagacctttcactatgtccttcctattcctactgcagccccaaacatctccctggctgtg
ggtccttttgaaatcctggtggacccctacatgcatgaggtgacccacttctgtctgcca
caacttctgcctctgctcaaacacacaatgtcttacctgcatgagatttttgagttctat
gaagagatcttgacctgccgctacccttactcctgcttcaagaccgtctttgtagacgag
gcctatgtgcaagtgtccgcctatgcatccatgggcattttcagcactaaccttcttcat
agtgccatgatcatagaccagactccaatgacacgtcagtgtctggcccaggctttagct
cagcagttctttggctgcttcatttccagaatgacatgggccgatgagtgggtgttgaag
gggatctctggctacatttatggcctgtacttgaagaaaacctttggagtcaatgagtat
cgacactggataaaagaggagctggataagatcgttgactacgagctaaagatgggaggt
gttctgctgcacccaaccttcagtggagtcaaagagaaagacaatccaaccccccatctc
cacttctctgtcaaacaccctcacacgttgtcctgggaatactacaagatgttccagtgt
aaggctcacctggtgatgaggttgatagagaacagaatcagcatggagttcatgctgcag
gtttttaataaactcttgagtttggccagtacggcctcgtctcagaagtatcagagtcac
atgtggagccagatgctagtgtctactcacgccttcctcaaatccatctccaacgtttct
ggcaaagacattgggccagtcatcaaacaatgggtagaccaaagtggtgtggtgaaattc
tttggaagttttgccttcaacaggaagaggaacgtgctggagctggagatccgtcaggac
tatacatcatctggaactcagaaatatgtgggtccgatcaaggtgactgtgcaagagttg
gacggatccttcaaccacacactgcagattgaggagaacagcctgaaacacgacatcccc
tgtcactccaagagcagacgaaacaagaaaaagaagattcccctgatgaatggagaagag
gtggacatggatctgtcagctatggatgctgattctcccctcctctggatccggatcgac
ccagacatgtccatcctgaggaaggtggagtttgagcaggcggacttcatgtggcagtac
cagctgcgctatgagagggatgtagtagcacagatggaggctattgcagcattagagaag
tttccaactcctgcctccagactggctctgaccgacatcctggagcaagaacagtgtttc
tacaaagtccgaatgatggcctgcttctgtttagccaggatcgccaacgcaatggtgagc
acatggcagggccccccagctatgaagtcactgttcaccagaatgttctgctgtaagagc
tgccccaacatcgtcaagaccaacaactttatcaactttcagagctattttttgcaaaag
acgatgcctgtggcaatggccttactgcgagatgtccagaacctctgtcccaaggatgtt
ctcaacttcatacttgacctaatcaaatataatgacaacagaaaaaacaaattttcagat
aactactaccgtgctgacctgatagaagcactcaccaactctctgacccctgccatcagc
atcaacaacgaggtgcgaacagtggacaacttgaacgctgatgtgcgtctcatcttggag
gagatcactcgattccttaacatggaaaaactgcttcccagtttcaggaacatcatcact
gtcagttgtctgaaggcgattcgtcagctgcagaaaaacggtcacattcccagtgacccc
tcactgttcaagtcctacgcagagtatggacactttgtagatgttcgtatcgccgctctg
gaggctctagtagactatacaagagtggagagaagtgcagtagaactacagtggctgctc
ctcatggtccaggacgacccttctcattacgtcagacatgagatccttggcatgctcagt
aagaacccaccgttcacaaaggcatcagagtctggcctgtgtaatgaagcactggtggac
caactgtggaagctcatgaactcaggcacttctcatgactggcggctccgctgtgacgca
gtaaacctctattacacattgtttggtctcactcgtccttcatgtctgccgctgcctgaa
ctgggcctcgtgctcaacctgaaggagaagaaagctgtgctcaatccaaccatcaagcct
gagttgggaatgatgagtgtcgccatcgatacacctgccagtataggtatccatggtgtc
ggaatgagctatgcagctgtagaagaagaaccagatcctgtttcattgggtgtttgtgga
gttggtcagccacttcaaagtttgaagagaaaggctgagacccccctgggatccccacca
gagccaggacaaatcctgcagcaacaggatgacgatggtagaggagggcgctataagatc
aggttcaacaacatggaagatgaagatatcgacatggagacggtccacgacagccaggct
ttcattcaccaacacctcaacttgttagaaagaccatctacaccaggtaaagaacctctg
tcagtggaacaggccattctctccatgcctgccacacctgtgccatcattctccaaagag
accacctcctcatcttccaaacacgccggcgagcatggccatcaccatcatcatcaccac
cacgaacacaagaagaagaagaaaaagcacaagcacaaacacaagcacaagcacaaacat
gagagcaaagacaaggaaagggagagagacaactcgcacgcctacagcaacagccccgcc
agtggcagatctctgcattcaccatcactgtctgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (43)   

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