KEGG   Cynoglossus semilaevis (tongue sole): 103391646
Entry
103391646         CDS       T04866                                 
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103391646 (hspd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103391646 (hspd1)
   03110 Chaperones and folding catalysts [BR:csem03110]
    103391646 (hspd1)
   03029 Mitochondrial biogenesis [BR:csem03029]
    103391646 (hspd1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103391646 (hspd1)
Enzymes [BR:csem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     103391646 (hspd1)
Messenger RNA biogenesis [BR:csem03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     103391646 (hspd1)
Chaperones and folding catalysts [BR:csem03110]
 Heat shock proteins
  HSP60 / Chaperonin
   103391646 (hspd1)
Mitochondrial biogenesis [BR:csem03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    103391646 (hspd1)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103391646 (hspd1)
  Exosomal proteins of other body fluids (saliva and urine)
   103391646 (hspd1)
  Exosomal proteins of breast cancer cells
   103391646 (hspd1)
  Exosomal proteins of colorectal cancer cells
   103391646 (hspd1)
  Exosomal proteins of bladder cancer cells
   103391646 (hspd1)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 103391646
NCBI-ProteinID: XP_008326223
Position
16:complement(2540000..2544808)
AA seq 578 aa
MFRLPTLMKQARPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDRYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVETVISELKKLSKPVTTPEEIAQVATISANGDV
EIGNIISSAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTSKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEAVGLALEDIQAHDFGKVGEVQITKDDTLLLKG
GGSPAEVEKRANEIAEQLENTTSDYEREKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPLLDTITPVNEDQKIGIDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQASPEIGYDAMQGEFVNMVEKGIIDPTKVVRTALLDAAGVASLLF
TAEAVVTEIPKEEKEMPGGMGGMGGMGGMGGMGGGMGF
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgtttcgtctacctacactcatgaagcaggcgaggcctgtgtgtcgagctctggcccct
cacctcactcgagcctacgccaaagacgtcaaatttggtgccgatgctcgggcactaatg
cttcagggcgtcgatctgctggctgacgctgtggctgtcaccatggggcctaagggtcgc
accgtcatcattgagcagagctggggcagccccaaggtcaccaaggatggcgtgacggtg
gccaaaagcatcgacctgaaggacaggtacaaaaacattggtgccaagctggtgcaggat
gttgccaacaacaccaacgaggaggctggcgacggcaccaccactgccaccgtgctggcc
cgcgccatcgccaaggagggatttgacaccatcagcaaaggagccaaccctgtggagatt
cgtcgtggagtaatgatggcagtggaaacggtcattagtgagctgaagaagctgtccaag
cccgtcacaactccagaagagattgcacaggtggccacaatctcagccaacggggacgtg
gaaattggtaacatcatctctagtgccatgaaaaaagtcggccgcaagggagtcatcacc
gttaaggatggaaagactctccacgatgagctggaaatcattgagggcatgaagttcgac
cgtggatacatctcaccttacttcatcaacacttccaagggtcagaagtgtgagttccag
gatgcatacgtgctactaagtgagaagaagatctctagtgttcagagcattgtacctgct
ctggaaattgccaaccagcaccgcaaacctctggttattgtcgctgaggatgtggatgga
gaagctctcagcacactggttctcaacaggctcaaggttggactgcaggtggttgcagtt
aaagccccaggctttggagacaaccgcaaaaaccagctgaaggatatggccattgccaca
gggggcactgtatttggagatgaagcagttggcctggctcttgaagacatccaggctcat
gactttggcaaggttggagaggtccagatcacaaaagacgacaccctgctcctcaagggt
ggcggcagcccggccgaggtcgagaagcgagcaaacgagattgcagagcagctggaaaac
accaccagtgactacgagagggagaagctgaatgagaggctggccaagctctcagacgga
gtggctgtgctcaaggttggaggaacaagtgacgtggaggtgaacgagaagaaggacaga
gtgaccgacgctctgaacgccaccagggctgccgtggaggagggtatcgtccttggtgga
ggctgtgctctgctgcgctgcattccattgctcgacaccatcacccctgtcaacgaagac
cagaagattggtatcgacatcatcagacgggcgctgcgtattcccgccatgaccattgca
aagaacgcaggcgtggagggttctctggtggtggagaagatcctgcaagcatcgcctgaa
attggctacgatgccatgcagggagagtttgtcaacatggtggagaagggaatcatcgac
cccaccaaggtggtgaggacagcacttctggacgctgcaggtgtagcttctttgctgttc
accgctgaggccgttgtcacggagattcccaaggaggagaaggagatgccaggaggaatg
ggtggtatgggtggaatgggaggaatgggtggaatgggtggtggcatgggattctaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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