KEGG   Cynoglossus semilaevis (tongue sole): 103398293
Entry
103398293         CDS       T04866                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03420  Nucleotide excision repair
csem04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103398293 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103398293 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csem04121]
    103398293 (ercc8)
   03400 DNA repair and recombination proteins [BR:csem03400]
    103398293 (ercc8)
Ubiquitin system [BR:csem04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103398293 (ercc8)
DNA repair and recombination proteins [BR:csem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103398293 (ercc8)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 Nup160
Other DBs
NCBI-GeneID: 103398293
NCBI-ProteinID: XP_008335082
UniProt: A0A3P8WIA9
Position
Z:20192260..20202660
AA seq 402 aa
MLGFLAARQTGLDDPLRLRRAESTRRVFGLELNPDRDVDQVHGNGINTIDIEAVEGRYML
SGGSDGVIVIYDLENYSGKPQYTCKAVCTIGRSNRYVHKFSVETVQWYPYDTGMIVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKYPKIQLCDLKSGSRTH
VLQGHRAEVLSVRWSPRYEHILATASADSKVKVWDVRRATGSLFTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYILTTGTDDRMRLWNSATGENTLVNYGKVCNESRKKVQFTV
SRGCSPEFVFVPCGSSIAVYALHTGELVTMLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPVLRVSDMEEKSRNSNNKVAADQTPVDPAFQDAWSSDED
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgttggggtttctggcagcaaggcagacgggattggatgatcctctaagactgcggcgt
gctgagtcaacaaggagggtttttggtctggagttgaatcctgacagagatgtggaccaa
gtccatggaaacggaattaatacaatagacatcgaagcagttgaaggcagatatatgttg
tctggaggttcagatggcgtgattgttatttatgacctggaaaactacagcgggaaaccg
cagtacacctgcaaagcagtctgcacaattggcaggtcaaaccgttatgttcacaaattc
agtgttgaaacggtccaatggtatccttatgacactggcatgattgtctccagttccttt
gataagaccatgaaggtctgggacacagaaactctaaagcctgctgaggtgtttgagttt
gagggaaatgtctacagtcaccacttgtctcccattgctagaaaacacagtctcattgca
gttggcaccaaataccctaaaatccagctgtgtgacctgaagtctggttcacgaactcat
gttctgcaaggtcacagagcagaggtcctctctgtgcgatggtcgcccagatacgaacac
atcttggctacagccagtgcagacagcaaggtgaaagtatgggatgtacgccgggctaca
ggtagcctcttcactctggaccagcacaatggagacaaatccaaagcctcctcagaggca
gttaacactgcacataacggcagagtgaatggcctctgcttcactggtgacggactctac
atcctcactactggaactgatgaccgtatgagactttggaacagtgccactggagaaaac
acgctggtgaattatggtaaagtctgcaacgagagtcgtaagaaggtgcagttcactgtg
tcacgcggctgcagcccagaatttgtgttcgtgccatgtggcagctccatcgcagtgtac
gccctccacacgggggagctggtcacgatgctacggggtcactacaacaatgtagactgc
tgcgagtttcacccggactatcaggagctgtatagtggagggaaagactgtaacatcctg
gcgtgggttcctgttctccgtgtatcagacatggaagaaaagtccaggaactcaaataat
aaggttgctgccgaccagacaccagtggaccctgcctttcaggatgcttggagcagcgat
gaagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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