KEGG   Cylindrospermum stagnale: Cylst_0221
Entry
Cylst_0221        CDS       T02398                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
csg  Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:csg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csg03009]
    Cylst_0221
Enzymes [BR:csg01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Cylst_0221
Ribosome biogenesis [BR:csg03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Cylst_0221
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Methyltransf_25 Cons_hypoth95 MTS PrmA Methyltransf_15 RrnaAD Met_10 Methyltransf_11 DOT1 Methyltransf_32 Methyltransf_12 TPMT Methyltransf_4
Other DBs
NCBI-ProteinID: AFZ22596
UniProt: K9WS57
Position
233793..235175
AA seq 460 aa
MTNIVWRQGELIEVAISDLSDTGDGVGRFENRVVFVPDTVPGDRVIVRLVNVKPQYANST
LQQILQPSPHRIRPGCIVADKCGGCQWQHIDYQYQLIAKRNQVIQALERIGGFVQPPVDL
VLVAASPLGYRNKATYPFGISATGQVQAGYYQKSSHQLINLNQCPVQDARLNPILAEVKQ
DIQRQGWSIYDERRHQGQIRHLGLRIGRGTGEILLTLVVKDWNLPGIEAVAIEWLKRYPH
LVGVSLNRNGDRTNAIFGSETRCVAGVPGLREKFAHLEFLVRPDTFFQVSTETTEALLQV
IQSQLNLQGHEVLVDAYCGIGTLTLPLAKQVRHATGLEVQPAAVEQAILNAQHNGIENVT
FQVGAVEKILPNLGIIPDVVLLDPPRKGCDRAVIETLRKLKPSQIVYVSCKVATLARDLK
ILCGEGLYAITRVQPADFFPQTSHVEAAAFLALSPNHKGA
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgactaatatagtttggcgacagggtgaattaatcgaagtggcgatttctgatttgagt
gacactggtgatggagtgggtcgctttgagaatcgcgtagtatttgtcccggatacggta
ccaggcgatcgcgttattgtccgactggtaaatgtcaaaccgcaatatgccaacagcacg
ctccagcaaatattgcaaccatcccctcatcgtatccgacccggttgtattgtggctgat
aaatgtggtggttgccagtggcagcatattgattatcagtaccagctaatagccaagcgt
aatcaagtgatccaagctttggaacgcattggtggttttgttcaaccgccagtagatcta
gtgctggtggctgcttcaccgctgggctatcgaaataaagctacctatccttttggcatc
tccgctacgggtcaggtacaagctggttactaccaaaaaagtagtcaccaattaattaac
ttgaatcaatgcccagtacaagatgctcgcttaaatcccatacttgccgaagttaagcag
gatatccaacggcaaggttggtcaatttacgacgaacgacgtcaccaagggcaaattcgc
catctcggtttacgcattggccggggtacaggtgaaattttgctgacgttagtggtcaag
gactggaatttaccggggattgaagccgtagcaattgagtggttaaaacgctatccccat
ttggtgggagtttcactgaatcggaatggcgatcgcacaaatgccatttttggcagcgaa
actcgttgcgttgctggagttcccggactgcgggaaaaattcgctcacctggaatttctt
gtccgcccagatacatttttccaggtttctacagaaacgacagaggcactattgcaagta
attcagtcacaactgaatcttcaagggcatgaggtgctagtcgatgcctactgcggcatt
ggcactttaactttgcctctggctaaacaagtacgtcatgctacgggtttggaagtacaa
ccagcagcggtggaacaggcaattctcaatgctcaacataatggcattgaaaatgtgaca
ttccaagtcggggctgtggagaaaattctcccaaatctgggcattataccagatgtggta
ttacttgatccgccacgcaagggatgcgatcgcgctgtaattgaaactttacgaaaattg
aaaccatctcagatagtttacgtcagttgtaaagtagccacccttgcccgtgacctcaaa
atcctttgtggagagggactgtacgctattacacgggtacaacccgctgatttttttccc
caaacgtcccatgtcgaagctgctgcctttctggcgctatcaccgaaccacaagggggct
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (32)   

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