KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_20043
Entry
COCSUDRAFT_20043  CDS       T02914                                 
Name
(RefSeq) DNA mismatch repair protein MutL
  KO
K08734  DNA mismatch repair protein MLH1
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    COCSUDRAFT_20043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_20043
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     COCSUDRAFT_20043
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 17037147
NCBI-ProteinID: XP_005643761
JGI: 20043
UniProt: I0YLE8
AA seq 656 aa
MSHVEPSIPRIVSLGEDVIQQIAAGEVIQRPVNAIKELLDNALDAGSSQINIVVKEGGKK
MLSVQDNGHGIQKEDLPLLCKRHATSKLRSFEDLDNLSTLGFRGEALASISTVAHLTVIT
KPPAAVAGLKIPYNRNTALEPPGPSPCAAQNGTTFIVDDLFYSNEQRRKALGSAAEEYAR
ILDLLGRYAISRPDVGFSCKKQGERRPDLHTVAGTSAQDIIRVVYGASVAQSLLPVHLEE
PGEKMDTSTAAATFSFTASGFVSCTHYSGRKGIFIIRINGHIVQCKALEHSLEAAYYSYA
RNKPFVYLDIKLPGDQVDVNVHPTKHEVVFLHQEEILTCISDALESLLQGPIQCHCMRSI
AHSGPAAVAGPAPARRATDKGSIRVTEMVRTDAQSQKLQSFFETATQAGAGSSAAAAVAL
SSVPRKRKMMTQPALFATQDEDMQDSEQQHRTASQSGALQSSVYVGMVDTSRLLVQHDTD
LLLLNIGNLGHDLFYQLVLQGWGNRQQLQIGSPVRIADLALIALQLLQPGLQEGDRWQAA
LRIERRLVAQAEFLAQGAAVDIDRDSGTLRRLPVILDGCKPDVNRLPLLVYRLAECPNWD
NEEQAISWTAQVLDSSSCDFTKCQYSLIKLVIFQFTLGSTVMVRQFQVLDIMDCRR
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgtcgcatgtagagccaagcattccgcgcatcgtcagccttggtgaggatgtaatccag
cagatcgcagctggagaagtcatacagaggccagtcaatgcaatcaaggagctgttggac
aacgcccttgacgcaggatcttcgcagatcaacattgttgtaaaagagggaggaaagaag
atgttgagcgtccaagacaatggccacggcatccagaaagaagatcttccacttctgtgc
aagcgacatgccacctcgaaacttcgatcctttgaggaccttgacaatctatcgactcta
ggcttccggggggaagcactggcctccatatcaacagtggcacacctcaccgtcatcaca
aaaccccccgcagctgttgctggcctcaaaatcccctacaacaggaacacggccttggaa
cctcctggaccctcaccatgtgctgctcagaatggcaccaccttcattgtggatgacctc
ttctacagcaacgagcagcgcaggaaggcgctaggaagtgctgctgaggagtatgcgcgc
atactggacctccttgggcgttatgctatcagcaggcctgatgttggattctcctgcaag
aaacagggggagcggcgtccagacttgcacacagtggcaggcacgtcagctcaggacatc
atcagggttgtctatggggcatcggttgcccagtcccttctcccagttcacttggaggag
cctggtgagaaaatggacacatcaactgcagcagccacattctctttcactgcctcgggc
tttgtgtcgtgcacacactacagcggtcgcaagggcatcttcattatcaggatcaatggc
cacattgtgcagtgcaaagcactcgagcacagcctggaagccgcctactactcttacgct
cgcaacaagcctttcgtctacctggatatcaagctgccaggtgatcaggtggatgtgaat
gtccacccgaccaagcatgaggtggtcttccttcaccaagaagagatcctgacctgcatc
agtgatgcactggagagcctgcttcaaggaccaatacagtgtcattgcatgcggagcatt
gcacacagtgggcctgcagcagtggccgggcctgctccagcgaggagggcaacagacaag
ggaagcatcagagtgacagagatggtccgaacggatgcccagtctcagaagctgcagagc
ttctttgagacggccacacaagctggcgcaggctcaagtgcagcagcagcagtcgcgctg
agttcagtaccgaggaagcgcaaaatgatgacgcagcctgccctatttgccacacaggat
gaagacatgcaggattcagagcagcagcacaggacagcctcgcagtcaggagcgctgcag
agctctgtgtatgtgggcatggtggacacctcccggctgctggtgcaacatgacactgat
cttttactcctaaacattgggaaccttgggcatgaccttttctaccagctggttctgcag
ggctggggcaaccggcaacagttgcagattggcagccctgtccgcatagcagacctggct
cttatagctctgcagctgctgcagccaggtctgcaagagggagacagatggcaggctgct
ctcagaatagagcggcgtttggtggcccaagctgagttcctggcgcaaggagcagccgtg
gacattgacagagacagtggcaccttgaggaggctgccagtcatcttggatggctgcaag
ccagatgtgaaccgcctgccgcttcttgtatacagattggcagagtgccctaactgggac
aatgaagagcaagccatcagctggactgcccaggtgcttgactcttcttcctgtgacttc
accaaatgccaatattccttgatcaagctagttatctttcagtttacattgggaagtact
gtgatggttcgtcaatttcaagtgcttgacatcatggactgcaggcggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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