KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_35728
Entry
COCSUDRAFT_35728  CDS       T02914                                 
Name
(RefSeq) tRNA synthetase class I (C) family protein
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    COCSUDRAFT_35728
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:csl01007]
    COCSUDRAFT_35728
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csl03016]
    COCSUDRAFT_35728
Enzymes [BR:csl01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     COCSUDRAFT_35728
Amino acid related enzymes [BR:csl01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   COCSUDRAFT_35728
Transfer RNA biogenesis [BR:csl03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    COCSUDRAFT_35728
 Prokaryotic type
    COCSUDRAFT_35728
SSDB
Motif
Pfam: tRNA-synt_1e tRNA-synt_1g DALR_2 tRNA-synt_1f tRNA-synt_1 CheZ SANT_DAMP1_like
Other DBs
NCBI-GeneID: 17043294
NCBI-ProteinID: XP_005649836
JGI: 35728
UniProt: I0Z3S3
AA seq 536 aa
MGCPAGLQSSCPEAKLSSTTSDDALQEHPKDLWLHNTMSGRKELFQPRPGQGNKVSMYCC
GVTVYDYSHVGHARVYCAFDVLFRYLRHLGYEVDYVRNFTDIDDKIIKRASETGEDPLQL
SQRFIHEFHTDMDALNCLAPTSEPKATDFISQMVDMIGRIVKAGHGYEADGSVWFSVESV
PGYGRLSGRSLDDNRAGERVAVNTTKRNPADFVLWKAAKVGEPKWDSPWGPGRPGWHIEC
SAMIRELMGPIIDIHGGGRDLIHPHHDNELVQSQAAACECDRENMLDHRDFVRWWMHLGF
VNVDSEKMSKSLGNFFTIRDVLQMYHPMALRWFLINTQYRQAINYTERSLQEASDRLYYI
YQTLQDAEAALTAAAAAGEQVSVATEQHSNGTKLLKSVEASLCDDLNTPQAFAALSEPLK
TMNDLLHTKKGKKAGGRLQTIATLQQALNSVLELLGLGAGDIGAVLVEMRQRALHRAGLK
EQDVELSIERRAVARAAKDYASADKERAFLAERGIMIMDGSEGTLWRPGIPDSQSN
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgggctgcccagctgggctgcagagcagctgcccagaggccaaactgtcatcaaccacc
tcagatgatgcactgcaagagcaccccaaagatctctggctgcacaacacgatgtcaggc
aggaaggagctttttcagccacggccaggccagggcaacaaagtcagcatgtactgctgc
ggtgtcactgtgtatgattacagtcatgtcggtcatgctcgcgtctactgcgcatttgat
gtgctcttccggtacctccgacaccttggctatgaggtcgattacgtccgaaacttcact
gacatcgatgataaaatcatcaagagagcttcagaaacaggagaggatcctttgcagctg
agccagaggttcatacacgaatttcacacggacatggacgccttgaattgcctagcgccc
accagcgagccaaaggcgaccgacttcatctctcagatggtggacatgattgggcgcatt
gtcaaagccgggcatggctatgaggctgatgggagcgtgtggttttccgtcgaaagtgtg
cctggctatggccgcctatcggggcgctctttggatgacaatcgagcgggagagcgcgtc
gctgtaaatacgacaaagcggaatccagcagactttgtcctgtggaaagcagcgaaagtg
ggagagccgaaatgggacagcccctgggggccaggccgcccagggtggcacatcgaatgc
agcgccatgatacgtgaactcatggggcccatcatcgacatccacgggggcggcagggac
ctcattcatccacaccatgacaatgagctggtccagtcacaggctgctgcctgcgaatgt
gatagagagaacatgcttgaccatcgcgacttcgtgcggtggtggatgcacctcggcttc
gtcaatgtggacagcgagaaaatgtccaagtcattgggaaatttctttacaatccgggat
gtcctgcaaatgtaccatccaatggcgctgcgatggtttctgatcaatacacagtaccgc
caagccataaactacacagaacgcagccttcaggaggcatcggaccggctctattacatc
taccagaccctgcaggatgcagaagctgccctgacagcagctgctgcagctggggaacag
gtgtctgtggcaacagaacagcacagtaacggcacaaagctactcaagtcagtggaagcc
agtctatgcgatgatttgaacacaccacaggcatttgcagccctgtcagagccactcaaa
acaatgaatgaccttctccataccaagaaggggaagaaggctggaggcagactgcagaca
atagcaactttacaacaggccctgaactccgtgttggagcttttgggacttggcgctgga
gatattggagctgtcttggtggaaatgcgccagcgggcgctccacagggctgggttgaag
gagcaggatgtcgagttgagtatagagaggcgagcagtcgccagggcggcaaaggactat
gcatcagcagacaaggaacgagctttccttgctgagcgggggatcatgatcatggatgga
tctgaaggcacgctgtggcggccgggcatcccagactctcaaagtaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (40)   

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