KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_46879Help
Entry
COCSUDRAFT_46879  CDS       T02914                                 

Definition
DNA glycosylase/AP lyase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
csl  Coccomyxa subellipsoidea
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    COCSUDRAFT_46879
Enzymes [BR:csl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     COCSUDRAFT_46879
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     COCSUDRAFT_46879
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
AA seq 373 aa AA seqDB search
MPELPEVEAARVLVHTHCKGKCIEQAIAADDTKVIEGVSPEELQNALRGRTIVDAHRKGK
HMWLELDGENPALLFHLGMTGYMVVEGVPIVQYVNAKKRGDEWPPKYWKVVLETDCGVKL
AFCDPRRFGKIRLQADPENNEPISKLGFDPILSMPDLATFSGMLAKQRRSVKPLLLDQSF
SAGVGNWVADEILYQAKIHPEQKAASLDEAQCAALHHQMKAVLQTAVDAGADSEKFPKTW
LFHQKWGAGKKGPAPRLEGNKIEYMQVGGRTTAYVPALQKLKAQAAEKPKAAKKKAADSE
TQAAVPAVKQPRKRAAPKTPKAQSVAAEEEEDGASEEAAKPVKKSTKKNNADTDDQANKA
EAAAPTKKRGRKT
NT seq 1122 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactccccgaggttgaggctgcaagagtgttagtccatacacattgtaagggc
aaatgtattgagcaggccatcgctgcagatgacacaaaggtcattgaaggagtaagtcct
gaggagctacagaatgctttgcgagggaggaccatcgtggatgcccataggaagggcaaa
cacatgtggttggagcttgatggtgaaaatccagccctgctgtttcacctagggatgacc
ggctacatggtggtggaaggcgtccccatagtgcagtatgtgaatgccaagaagcgtgga
gacgaatggcctccaaagtactggaaggtggtgcttgagacagactgtggagtcaagctg
gcgttctgtgaccccaggagatttggaaaaatcaggcttcaggccgatccagagaacaat
gagccaatcagcaagctgggcttcgacccgatcttgagcatgccagatctggccaccttc
tcaggcatgctcgcaaagcagaggcgctctgtcaagcccttgctgctggatcagagcttt
tctgcgggagtgggcaactgggtggccgacgagatcttgtaccaggccaagatacaccca
gaacagaaggcagcctcccttgacgaagcgcagtgcgctgcactccaccaccagatgaag
gccgtccttcagactgctgttgatgctggcgccgattcagagaagttcccaaagacttgg
ttgttccatcagaaatggggagctggcaagaaggggccggccccgaggcttgaaggaaac
aagatagagtacatgcaggtggggggtcgcacaacagcatatgtgccggcacttcagaaa
ctcaaagctcaggccgctgagaagccaaaagcagcaaagaagaaggcagctgacagcgag
actcaggctgccgtaccagcagtaaagcagcccaggaagagagcagcgcccaaaaccccg
aaagcacaaagtgtcgctgcagaggaagaggaagacggagcgtctgaagaagcagccaag
ccagtaaagaagagcacaaagaagaataatgcagatacagatgaccaggcaaacaaggct
gaagcggcggcaccaaccaagaaaaggggcaggaaaacttaa

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