KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_49065
Entry
COCSUDRAFT_49065  CDS       T02914                                 
Name
(RefSeq) NUC189-domain-containing protein
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    COCSUDRAFT_49065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_49065
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    COCSUDRAFT_49065
SSDB
Motif
Pfam: Utp12 PQQ PQQ_2 WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 17036971
NCBI-ProteinID: XP_005643354
JGI: 49065
UniProt: I0YK91
AA seq 671 aa
MALRVCSWELALRMPCLPGVTASGSLLFNINSTAAPPDGRLAGPAPSSGSEQSKCIAWAY
GPDKAKKNGRAVANAAGRLMLVVGTAAGNVRAFSAATAKELWAANGCNEGGVTSLAFEAD
AGAAGLLYSVGSNNHVCALDVASGAQVVKFKAGSHPLSCVGAAPDCQSVLVGSSSLALWN
VAEQKRVAKFMGHSLPVRAIAFSPSGSHALSASEGERQVALWALPTIAATTSKKSRPSVG
LLSLEEPAVQLATSAASSDSAADGASSFQVAAVSTAGRAYVWSCSTAEEGDRVSSSLSVR
VSVEASTSETVHNQGEGGILAAQFESPDTLLLARGSVAKPVFERVQLLKDSTTTKQIQLE
RILDGVLIQASGRGGEASTSGKGAAAAAKGRVAYVGAEPTDAELLMSRVAEDGAARQSRK
RRAEGDEAGAVVSELPAENGPVSDGPTLGQRLEALQVRSQQERMDVDGGAGALQAGPLKA
DSVAVLLGQALQAQDKALLEKCLNTGNEAVIGASVRRLRPHHAAALLEAAVERLRSRANR
GTALTAWIRAVLLHHTAYLMAAPGVLPILTSLSQTIEARTAQLKPLAALAGRLDLLVAHL
PKPDAAASADDLELPGPEVVYVEEDELEAENPLAAVPDSDAEGSDDEDESEEEDAGEEDG
DIDMDDLDDTD
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggcattgagggtttgcagttgggaacttgcgctgagaatgccatgtcttcctggtgtg
acagcctctgggagcctcctcttcaacatcaacagcactgcagcacctccggatgggaga
ctagcaggaccggcgccctcatcaggcagcgagcagagcaaatgcatcgcctgggcctat
ggtccagacaaggcgaagaaaaatgggagggcggtggcaaatgcggcagggcgcctgatg
ttggtggtggggaccgcggctggcaatgtgcgagccttctcagcagcaactgccaaggag
ctctgggcggctaatggctgcaacgaggggggggtgacatcactggcgtttgaggctgat
gccggcgccgcggggctgctctacagcgtgggcagcaacaaccacgtgtgcgcgctggac
gtagcctctggagcgcaggtcgtcaagttcaaggctggcagccacccgctctcctgtgtc
ggggcagccccagattgccagtcagtgctggtgggcagcagctctctggcgctgtggaat
gtggcggagcagaagcgcgtggccaagttcatgggacactcgctgccggtgcgcgcaatc
gctttcagcccgagcgggagccacgctctttcggcgtctgagggcgagcggcaggtcgca
ctctgggcccttcctaccatcgctgccacaacgtcgaagaagagccggcccagtgttggg
ctactgtcactggaggagcctgcggtgcagctcgccacatcagcagcctccagcgacagc
gcagcagatggggcgtcatctttccaggtggcggcagtgagcacggcaggcagagcgtat
gtgtggtcctgcagcacggcagaggagggcgaccgcgtcagcagcagcctcagcgtgcgc
gtcagcgtggaagcttcaacctctgagacggtgcacaaccagggcgagggtggtatcttg
gcagcacagtttgagtcgccggacacgcttcttctggcgaggggttctgtggcaaagcct
gtctttgagcgggtgcagctgctgaaggacagcaccaccaccaaacaaatacaactggaa
aggatcctggacggggtgttgatacaagcgagtgggaggggcggcgaggcgtccacatct
gggaagggcgcggcggcggcggcaaagggccgcgttgcgtatgtgggggctgagcctacc
gatgcagagttgctgatgtcgagagtggccgaggacggcgctgcacgacagagcaggaaa
aggagagcggaaggggatgaagcaggagcggtggtcagcgagctgcctgcagagaatggg
ccggtgtcagatgggcccacccttggacagagactggaagcactgcaagtgcgatcacag
caggagcggatggatgtggacggtggggcgggggcgctgcaggcagggccgttgaaggcc
gattcggtggctgtgctgctggggcaggcgcttcaggcacaggacaaggcgctgctcgaa
aagtgcctgaacacggggaacgaggcggtgataggcgcgagcgttcggcggctgcggccg
catcacgcggcggcgctgctggaggcggcggtggagcggctgcgttcgcgcgccaaccgc
ggcaccgcgcttacggcctggatccgcgccgtgctgctgcaccacaccgcctacctcatg
gccgcgcccggcgtgctccccatcctcacctccctctcccagaccatcgaggcgcggacg
gcgcagctgaagccgctggcagcgctggctggccgcctggacctgcttgtcgcgcacctg
cccaagcccgacgctgccgccagtgccgacgacctcgagctccccggtcctgaggtggtg
tatgtggaggaggatgagcttgaggcggagaacccccttgcagcagttccagactccgat
gcagaaggatctgacgatgaagatgagtcagaggaagaggatgctggggaggaggatggt
gatattgacatggatgaccttgatgacactgattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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